Gene Strop_1302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1302 
Symbol 
ID5057755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1467253 
End bp1468332 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content73% 
IMG OID640473574 
Productamidohydrolase 
Protein accessionYP_001158150 
Protein GI145593853 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTGC ACGTGCGTGG TGTGCTCCTG CCCGAAGACG AGGTCCGGGA CATCTGGCTG 
GTCGGTGACC GGGTGACCTT CGAGCCGGTG GCCGGCGCGG AGACCATCGC CGACGGGGGC
TTCCTGATCC CCGGCCTGAC CGACGCGCAC TGCCACATCG GCATCGCCCG GGGCGGGACG
CCGATCACCT CGCTCGACCA GGCCCGCGAG CTGGCCCAGG CCAACCGGGA CGCCGGGGTG
CTCGCCATCC GGGACGCCGG CTCCCCGTAC CCGTATCCGG AGCTCGACGA CGCTCCGGAC
CTGCCACGGC TGGCCCGGGC CGGCCGGCAC GTGGCCCCGC CGAAGCGCTA CCTGCGCGGC
GTCGGGGTGG AGGTCGGCGC GGCAGAGGTG GCCGCGACCG TCGCCGCGCA GGCCGACGCC
GGCAACGGCT GGGTCAAGCT GGTCGGCGAC TGGATTGATC GCGGCGTCGG CGACCTCGCC
CCGGCCTGGG ACCCGGAGAC CATGACCGCA GCGGTTCGCG CCGCGCACGC CGCCGGGGCC
CGCGCCGCGG TGCACACCTT CTCCGAGTCC GCCGTTGAAA TCATGGTGCG GGCCGGGGTC
GACTCGGTGG AACACGGCAC CGGCCTGAGC CTGGACCTGA TCGACGTGAT GGCCCGGCAG
GGCACCGCGC TCATACCAAC TATGATCAAC ATACGTAATT TCGGTGGCAT CGCGGACCAG
GCGCGGGCGA AGTTTCCCAG CTACGCCGAC CACATGCTCG CCCTGCGAGA CCGCTTCCCC
GAGGTGGTCC GCGCCGCCCA CCAGGCCGGC GTGCCGATCT ACGTCGGCAC GGATGCCGGC
GGTGGCATCG CACACGGTCT GGCCGCCGAG GAGATGCTGG TGCTGCACGA AGAGGCCGGG
ATGCCCGCCG AGGCCGTCCT CGCCGCCGCC TCCTGGCAGG CCCGCGAGTG GCTCGGCTTC
CCCGGTCTGG TCGAGGGGGG CCTGGCCGAT CTGATCGTCT ACCCGGAGGA TCCACGGCGA
GACCTCCGCG TCGTCCGGTC GCCCACCCGG GTCGTCCTCC GCGGCCGGGT CCTGCGCTGA
 
Protein sequence
MALHVRGVLL PEDEVRDIWL VGDRVTFEPV AGAETIADGG FLIPGLTDAH CHIGIARGGT 
PITSLDQARE LAQANRDAGV LAIRDAGSPY PYPELDDAPD LPRLARAGRH VAPPKRYLRG
VGVEVGAAEV AATVAAQADA GNGWVKLVGD WIDRGVGDLA PAWDPETMTA AVRAAHAAGA
RAAVHTFSES AVEIMVRAGV DSVEHGTGLS LDLIDVMARQ GTALIPTMIN IRNFGGIADQ
ARAKFPSYAD HMLALRDRFP EVVRAAHQAG VPIYVGTDAG GGIAHGLAAE EMLVLHEEAG
MPAEAVLAAA SWQAREWLGF PGLVEGGLAD LIVYPEDPRR DLRVVRSPTR VVLRGRVLR