Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1250 |
Symbol | |
ID | 5057700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1412028 |
End bp | 1412726 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640473519 |
Product | hypothetical protein |
Protein accession | YP_001158098 |
Protein GI | 145593801 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.786413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.718016 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATTC GCAAAGAGCT CTTCTCTGCG GGCGGTGTTC CCGCGGTCCG TTGGACACCA GCGGACGACG CCACCGACCG CCCACTGATC CTCATCGGCC ACGGCGGCGG TCACCACAAG ACCCACCCCG CCGTCCTGCA CCGCGCCCAC CACTTCGTAC GCAGCGGCTT CGCGGCCGTC TCGGTGGATG TCCCGAACCA CGGTGACCGC CCGACCGACG ACCATCTCCA GCGCATGGCC ACCGAGATTC GGACCCGTGC CGACTCCGGC GAAGACCTGG CCCCGCTGCT CGCCGCGTTC CACGCCCGGG TCGCCGAGCA GACCGTCGGG GAGTGGCAGG CCGTCCTGGA CCACCTTGAA TACGGACCCG TCGGCTACTG GGGCGTCTCA CTGGGCTGCG GGCTCGGCGT TCCGTTCGTC GCCGCCGAGC CCCGGGTCCG CGCAGCGGTC CTCGGCCTCG GCGGGGCCTC CGCCCCCGCT TCCGCGGCGG CCGCCGCACG GATCACGGTG CCGATCGAGT TCCTGATCCA GTGGGACGAC GAGCGGATAC CCCGCGCGCA GAGCGTGGCC CTCTTCGACG CGTTCGGCTC AGTCGACAAA ACCCTGCACG CCAACCCGGG TCGGCATGGC GACCGACTCC CCGAACACGA GTTGGACAGC GCGGTCCGGT TCTTCACCCG GCACCTCACG CCGCCCTGA
|
Protein sequence | MTIRKELFSA GGVPAVRWTP ADDATDRPLI LIGHGGGHHK THPAVLHRAH HFVRSGFAAV SVDVPNHGDR PTDDHLQRMA TEIRTRADSG EDLAPLLAAF HARVAEQTVG EWQAVLDHLE YGPVGYWGVS LGCGLGVPFV AAEPRVRAAV LGLGGASAPA SAAAAARITV PIEFLIQWDD ERIPRAQSVA LFDAFGSVDK TLHANPGRHG DRLPEHELDS AVRFFTRHLT PP
|
| |