Gene Strop_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1250 
Symbol 
ID5057700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1412028 
End bp1412726 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content71% 
IMG OID640473519 
Producthypothetical protein 
Protein accessionYP_001158098 
Protein GI145593801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.786413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.718016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTC GCAAAGAGCT CTTCTCTGCG GGCGGTGTTC CCGCGGTCCG TTGGACACCA 
GCGGACGACG CCACCGACCG CCCACTGATC CTCATCGGCC ACGGCGGCGG TCACCACAAG
ACCCACCCCG CCGTCCTGCA CCGCGCCCAC CACTTCGTAC GCAGCGGCTT CGCGGCCGTC
TCGGTGGATG TCCCGAACCA CGGTGACCGC CCGACCGACG ACCATCTCCA GCGCATGGCC
ACCGAGATTC GGACCCGTGC CGACTCCGGC GAAGACCTGG CCCCGCTGCT CGCCGCGTTC
CACGCCCGGG TCGCCGAGCA GACCGTCGGG GAGTGGCAGG CCGTCCTGGA CCACCTTGAA
TACGGACCCG TCGGCTACTG GGGCGTCTCA CTGGGCTGCG GGCTCGGCGT TCCGTTCGTC
GCCGCCGAGC CCCGGGTCCG CGCAGCGGTC CTCGGCCTCG GCGGGGCCTC CGCCCCCGCT
TCCGCGGCGG CCGCCGCACG GATCACGGTG CCGATCGAGT TCCTGATCCA GTGGGACGAC
GAGCGGATAC CCCGCGCGCA GAGCGTGGCC CTCTTCGACG CGTTCGGCTC AGTCGACAAA
ACCCTGCACG CCAACCCGGG TCGGCATGGC GACCGACTCC CCGAACACGA GTTGGACAGC
GCGGTCCGGT TCTTCACCCG GCACCTCACG CCGCCCTGA
 
Protein sequence
MTIRKELFSA GGVPAVRWTP ADDATDRPLI LIGHGGGHHK THPAVLHRAH HFVRSGFAAV 
SVDVPNHGDR PTDDHLQRMA TEIRTRADSG EDLAPLLAAF HARVAEQTVG EWQAVLDHLE
YGPVGYWGVS LGCGLGVPFV AAEPRVRAAV LGLGGASAPA SAAAAARITV PIEFLIQWDD
ERIPRAQSVA LFDAFGSVDK TLHANPGRHG DRLPEHELDS AVRFFTRHLT PP