| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1105 |
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| Symbol | |
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| ID | 5057552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1249765 |
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| End bp | 1250379 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640473372 |
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| Product | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase |
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| Protein accession | YP_001157954 |
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| Protein GI | 145593657 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.99956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAGG TCCTGCTCGC CACCCGGAAC CGGAAGAAGC TCATCGAGCT GCAACGCATC
CTCGACGGCG CCCTGGGCGC GCACCGGATC GCCCTGATAG GCCTCGACGA TGTCGAGGCC
TATCCGGAGC TGCCGGAGAC CGGCCTGACG TTCGGTGAGA ATGCCTTGAT CAAGGCTCGG
GAGGGGTGCC GACGCACCGG GTTGCCCACC ATCGCTGACG ACTCCGGCCT GGCGGTGGAG
GCGCTCAACG GCATGCCCGG TGTCTTCAGT GCCCGATGGG CCGGCCAACA TGGTGACGAC
CACGCCAACC TTCAGCTGGT CCTGAACCAG ATCGCCGACG TGCCGGACGA GCATCGGGGG
GCGTCCTTCG TCTGCACGGT GGCCCTGGCG CTGCCCGGTG GCAAGGAGCA CCTGGTCGAC
GGCCGACAGG CCGGTCGCCT CCTGCGGGAG CCGCACGGCG ACGGCGGCTT CGGCTACGAC
CCGATCTTTA GAGGCGATGG GCAGGACCGT ACGAACGCCG AGCTGACGCC GGCGGAGAAG
GACGCGATCA GCCACCGCGG CAAGGCGCTG CGCGAGCTGG CGAAGCTGGT TGCCAAGGTG
CTGCCGCCGG CCTGA
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| Protein sequence | MNKVLLATRN RKKLIELQRI LDGALGAHRI ALIGLDDVEA YPELPETGLT FGENALIKAR
EGCRRTGLPT IADDSGLAVE ALNGMPGVFS ARWAGQHGDD HANLQLVLNQ IADVPDEHRG
ASFVCTVALA LPGGKEHLVD GRQAGRLLRE PHGDGGFGYD PIFRGDGQDR TNAELTPAEK
DAISHRGKAL RELAKLVAKV LPPA
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