Gene Strop_1085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1085 
Symbol 
ID5057532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1230506 
End bp1231099 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content67% 
IMG OID640473352 
Productdeaminase-reductase domain-containing protein 
Protein accessionYP_001157934 
Protein GI145593637 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.655465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.734607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACAC TCATCGTGGT CAGCGCCGTA TCGATGGACG GCTTCTACGA GGGCCCCGGA 
AGCGGCGTGA CAGTGCCGAT GGAGAACTGT TTCGGCACGT ACAACCTCGA ACGGATCCAG
GCGGCCGACA CCGTGCTGCT CGGCGCGAAC TCCTACGCCA TGTTCTCGGG CTACTGGCCC
GGCGTCGCCG ACGACAGCTC CGCCTTCGAG GCGGACCGGG AGTTCTCAAA GATCTACAAC
CGCGTTGACA AGGTGGTCGT CTCCGACCAC GCCTCCCCGT TGCCGGCCGA GCATCCCTGG
GCCGACAACA CCCGCATCAT CAGCCGAGCC GACGCTCCCA CCGAGATCGC CAAGCTCAAG
GAGCAGGACG GCCGGGAGAT CGTCACCTGG GCCAGCCGCG CCACCTGGAA CGGGCTACTC
CAGCACGACC TGATCGACGA GATCCACGTG CTCCTCGGCC CAGCCGCCAT CGCCGGCGGC
ACCCCCCTGT TCGAACGCCC GGTCTCGCTC CGGCGCCTGG GAGTACGCAC CTTCGACAAC
GCCGACACCG TCCTGCTCCA GTACGGCGTA CGGCAGCCAT CCGAGCAGCG GTGA
 
Protein sequence
MRTLIVVSAV SMDGFYEGPG SGVTVPMENC FGTYNLERIQ AADTVLLGAN SYAMFSGYWP 
GVADDSSAFE ADREFSKIYN RVDKVVVSDH ASPLPAEHPW ADNTRIISRA DAPTEIAKLK
EQDGREIVTW ASRATWNGLL QHDLIDEIHV LLGPAAIAGG TPLFERPVSL RRLGVRTFDN
ADTVLLQYGV RQPSEQR