Gene Strop_1049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1049 
Symbol 
ID5057496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1187404 
End bp1188426 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content65% 
IMG OID640473318 
Productregulatory protein, LysR 
Protein accessionYP_001157900 
Protein GI145593603 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.97331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGATC ACGCGGACTT CAGCCTGGCT CAACTCCGGT ACTTCGTAAC TTCCGCCGAG 
ATGGGAAACA TATCCGGCGC GGCACAGCAA TTACATGCTT CGCAGTCGGC CGTCTCGATG
GCGATCCAGC GCCTGGAGAA ACAACTGGAC ACCAAGCTGT TCTTCCGGCA CCGCACCAAA
GGAGTCAGCC TGACTCCCAG CGGCCGCGTC CTGCTCGACC CCGCGAAGTC GTTGCTGGCC
CAGGCGCAGG AGATGCTCGC CCACAGCCGC GAGTGGCAGG GCGAGACCTG CGGAATGCTC
AATGTGGCCG TTCTCCGCTC AGTCGCGCCC GATCTGGTGC CGGCTGTGAT GAGCCGAGTA
AAGAAGATGC GCCCTGGGCT GGCGGTCACC GTCCACGAGG GAACCATGGA CGATGTTCTC
GAACTGCTGC GCACGGGCAC GTGTGAACTC GCCGTAGTCC CGGAGCTGCC AGGTCAGGCT
CTGTCGTTCG CCCGGCTGGC GAAGGTGCTC ATGGCAGCGG TCGTTGCATG GTCCGATCCG
CTGGCGCCCG TGGGGCGCGC AACGCTTCGA CAGTTGGCCA CCCGGCGTCT CCTCGTGGCC
GACCTGGACG TTGATCGCCA AGTCGGCCTG GACACCCGGA CACGGCTGTT CGCCGACGCC
GGCACCCCCA CGCCAGAGGT GGTGCTGACA TCGAGCATCG CCACGATGCT TGGCCTCGTC
GGGGTCGGCG AGGGCTTCGC CCTGCTATAC CGGACCGCAG CCAGCCAGTG CTACCGACAG
GAACTCGCCT GGATCGACAT CGTCTCCGAA CGCCCGTGCG CATCCTGGCT TGGTGTGGCG
ACCATACCCG GCCTGGCTCT CAGCAGCCGT GCGGAGCTAT TCGTTTCCCT GCTCGATGAC
GCTGTCCGGA GCGTCTACTG CACGACGGCG GACGACGGGG TGAGTTCCCC TGGCAGCACT
GATATCTTCG ATCATGGAGC CTCTTTTGCT ACGGACCCCG CCGCACCCGC CTGGTCGACC
TAG
 
Protein sequence
MADHADFSLA QLRYFVTSAE MGNISGAAQQ LHASQSAVSM AIQRLEKQLD TKLFFRHRTK 
GVSLTPSGRV LLDPAKSLLA QAQEMLAHSR EWQGETCGML NVAVLRSVAP DLVPAVMSRV
KKMRPGLAVT VHEGTMDDVL ELLRTGTCEL AVVPELPGQA LSFARLAKVL MAAVVAWSDP
LAPVGRATLR QLATRRLLVA DLDVDRQVGL DTRTRLFADA GTPTPEVVLT SSIATMLGLV
GVGEGFALLY RTAASQCYRQ ELAWIDIVSE RPCASWLGVA TIPGLALSSR AELFVSLLDD
AVRSVYCTTA DDGVSSPGST DIFDHGASFA TDPAAPAWST