Gene Strop_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1038 
Symbol 
ID5057484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1177316 
End bp1178731 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content65% 
IMG OID640473307 
Producthypothetical protein 
Protein accessionYP_001157890 
Protein GI145593593 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.888049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACAC AGTACTATCC GGAAGACGCC GCTCTCACAG TCGAGCTGCG TAATCAGGTT 
GAGGCGTTCA TTGCCGGCAA GTGGGACGCG GCGATGCTGG CAGCGCACCA GACCCGCAAG
CTGCGTGAGG TCGTTGCTTT TGCCCGCGAC AACTCGCCGT TTTACGGGGA GCGCCTGGTC
GGGGTGACCG ACGAGGTGAT CGCGGCCCTG CACCCCGGTA ACCTGCGCGA CCTCCCGTTC
ACGACGAAGG ATGACCTGCG GCGGGCGCAG TTCGACATGT TGTCGCGGCC GCTCTCCGAC
GCGTGGATCT TCTACGAAAC CACGGGCACC ACTGGTGTTG CGACACCGTG TCCACGTACC
AATGTGGACT CTTTACACAA CAACACCATT CTCACGGCGT ACTACCGCGA CATTTTCGGC
GCGCGTGGCA GCGGCCAGGT CATCGGTATC TCGGGCCCGA GTGAGCTGCA CTCTACCGGC
GACACCTTCG GCGACGTTTG CCGCAGCCTG GGCCACGCGG TCGCCAAGAT GTGGCCACAC
TCGCCGATGG TCGGCTTCGA CCGGGCCCTG GAACTGATGC GTCGGCTACC CGTGACCGGC
CTGTTCTGCA CGCCCGGCAT GGCCATGCAC CTGGCACAGC GAGCCATCGA CGCCGGGCTG
CGGCCGCGGC TGGACTTCTC CCTCGATCTG CTGCTGCTCA CCGGCGAGCT GCTCTCGCCT
AGTCTGCTGA CCAACATCGG CCTGCTCTGG GACGCCGAGG TGCACAACGT GCTCTACGCC
TCACAGGAGG CCTCCGTGCT AGCGGCGGCG ACTTCGGACG GTCGGCTGCG AACCGCCCCG
CTGATCAACC TCTACGAGGT CATCGATCCC GACAGCGGGG AACCGGTCGA TTCCGACGGT
GCCGGCCAGT GCTACGGCGA GCTCGTGGTC ACCAACCTCT ACTTGGGCGC CAAGCCTCTC
ATCAGATACC GCACCGGAGA CCTGGTCCGG ATGACCGAGT CTGGCGTGTC TGCCGCCGTG
CCCGCACCCT CGGTCGAGGT CCTCGGCCGG GCACACGATC GGTTGACGCT CAACGGACAC
CTCATCAGCG GATATGACTT CGAGAATCTT TTGCTCGGCC AGTTCCGTGG CTTCTGTGAC
TACCAGGTCA CAATCAAGCG CGACGATGCT GGCGTCGATC GAGTCGCTCT GACGCTGCGG
TCCGATCCCA CCATCGGCTT TCCGAGCGTC GAGGGTGCCG TGCAGCAGTG CCTCGACGAG
CTCGACACGC CGCTGACCGT ACGGTTCGGC ACTCCCGGCG CGATCACCGG GACTGGCGCG
ATGGTGAGCT GGAAGGCTGC CCGCGTGATC GACCAGCGGA CCGGCCAGTC GGACGAGGTC
GAAGCGGCCG AGAACATCGC GGCGTCGAGG TCCTGA
 
Protein sequence
MFTQYYPEDA ALTVELRNQV EAFIAGKWDA AMLAAHQTRK LREVVAFARD NSPFYGERLV 
GVTDEVIAAL HPGNLRDLPF TTKDDLRRAQ FDMLSRPLSD AWIFYETTGT TGVATPCPRT
NVDSLHNNTI LTAYYRDIFG ARGSGQVIGI SGPSELHSTG DTFGDVCRSL GHAVAKMWPH
SPMVGFDRAL ELMRRLPVTG LFCTPGMAMH LAQRAIDAGL RPRLDFSLDL LLLTGELLSP
SLLTNIGLLW DAEVHNVLYA SQEASVLAAA TSDGRLRTAP LINLYEVIDP DSGEPVDSDG
AGQCYGELVV TNLYLGAKPL IRYRTGDLVR MTESGVSAAV PAPSVEVLGR AHDRLTLNGH
LISGYDFENL LLGQFRGFCD YQVTIKRDDA GVDRVALTLR SDPTIGFPSV EGAVQQCLDE
LDTPLTVRFG TPGAITGTGA MVSWKAARVI DQRTGQSDEV EAAENIAASR S