Gene Strop_0898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0898 
Symbol 
ID5057341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1005067 
End bp1005753 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content71% 
IMG OID640473167 
Productdienelactone hydrolase 
Protein accessionYP_001157753 
Protein GI145593456 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0905953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAGA TGGTGACGTA CCGGTGCAAC GGTGGTACGG GCGAGGGGTA TCTCGTGGTA 
CCACCCGGCG GTACGGCCAG CCCGGCCGTC ATTGTGATCC AGGACTGGTG GGGTCTGGCA
TCACACGTCC GGGCGGTCGT CGACCGTTTC GCCGAGGCCG GCTTCGTCGC CCTCGCCCCG
GATCTTCGGC ACGGCGGGCC GGCCAACAAG CCGGACGAAC CCCGGCAACT GCTCAACAGC
GGGCAGTTGG ACGCCGCCGC GGCGGATGTC GCCGCCGCGG CCGACTATCT CGCGGGACGG
CCGGAGGTCG CCGGCAAGAT TGGTTGCGTG GGCTTCCGCG CCGGGGCCAG CCTGGCGCTC
TGGTCCATTG CCCGGACCGA GCGGATCGTG GCGACCTCGG CCTTCTACCC CCTGTTGCCC
GGGGACGGGA TGCGCCCGGA GCGGACGGAC TACGCGGGTA AGGCCGCCGT CATCCACTGC
TGTGAGGCCG ACGGCACCTC GGTCGACCCG GGGGTGCAGC TCGTCCGTCG AGCCATCGAG
ACCGGTGGCG GCACCTGCCA GACCTACGAC TACCCGGGCA CCGCGCACGC CTTCTTCAAC
GAGGACCGGC CGGAGAACTT TGACCACCGG GCGGCTGCCC GGGCGTGGGC CCGCACCCTC
GAACTCTTCC GGGCGAAGCT TGGCTGA
 
Protein sequence
MGEMVTYRCN GGTGEGYLVV PPGGTASPAV IVIQDWWGLA SHVRAVVDRF AEAGFVALAP 
DLRHGGPANK PDEPRQLLNS GQLDAAAADV AAAADYLAGR PEVAGKIGCV GFRAGASLAL
WSIARTERIV ATSAFYPLLP GDGMRPERTD YAGKAAVIHC CEADGTSVDP GVQLVRRAIE
TGGGTCQTYD YPGTAHAFFN EDRPENFDHR AAARAWARTL ELFRAKLG