| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0898 |
|---|
| Symbol | |
|---|
| ID | 5057341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1005067 |
|---|
| End bp | 1005753 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640473167 |
|---|
| Product | dienelactone hydrolase |
|---|
| Protein accession | YP_001157753 |
|---|
| Protein GI | 145593456 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0905953 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGAGA TGGTGACGTA CCGGTGCAAC GGTGGTACGG GCGAGGGGTA TCTCGTGGTA
CCACCCGGCG GTACGGCCAG CCCGGCCGTC ATTGTGATCC AGGACTGGTG GGGTCTGGCA
TCACACGTCC GGGCGGTCGT CGACCGTTTC GCCGAGGCCG GCTTCGTCGC CCTCGCCCCG
GATCTTCGGC ACGGCGGGCC GGCCAACAAG CCGGACGAAC CCCGGCAACT GCTCAACAGC
GGGCAGTTGG ACGCCGCCGC GGCGGATGTC GCCGCCGCGG CCGACTATCT CGCGGGACGG
CCGGAGGTCG CCGGCAAGAT TGGTTGCGTG GGCTTCCGCG CCGGGGCCAG CCTGGCGCTC
TGGTCCATTG CCCGGACCGA GCGGATCGTG GCGACCTCGG CCTTCTACCC CCTGTTGCCC
GGGGACGGGA TGCGCCCGGA GCGGACGGAC TACGCGGGTA AGGCCGCCGT CATCCACTGC
TGTGAGGCCG ACGGCACCTC GGTCGACCCG GGGGTGCAGC TCGTCCGTCG AGCCATCGAG
ACCGGTGGCG GCACCTGCCA GACCTACGAC TACCCGGGCA CCGCGCACGC CTTCTTCAAC
GAGGACCGGC CGGAGAACTT TGACCACCGG GCGGCTGCCC GGGCGTGGGC CCGCACCCTC
GAACTCTTCC GGGCGAAGCT TGGCTGA
|
|---|
| Protein sequence | MGEMVTYRCN GGTGEGYLVV PPGGTASPAV IVIQDWWGLA SHVRAVVDRF AEAGFVALAP
DLRHGGPANK PDEPRQLLNS GQLDAAAADV AAAADYLAGR PEVAGKIGCV GFRAGASLAL
WSIARTERIV ATSAFYPLLP GDGMRPERTD YAGKAAVIHC CEADGTSVDP GVQLVRRAIE
TGGGTCQTYD YPGTAHAFFN EDRPENFDHR AAARAWARTL ELFRAKLG
|
|---|
| |