Gene Strop_0881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0881 
Symbol 
ID5057324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp981929 
End bp985174 
Gene Length3246 bp 
Protein Length1081 aa 
Translation table11 
GC content70% 
IMG OID640473150 
Producttripeptidyl-peptidase II 
Protein accessionYP_001157736 
Protein GI145593439 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAAAC CCCGAAATCT GAGCCGGCGT ACCTCCGCCG GACTCTTCGC CTCGGTCATG 
GCCGCCAGCG CCGTGACCGT CGCGGGCGGT GCCACCACAG CGAGCGCCGA ACCCGCCACG
CCGACCGCCC CCGTCGAGGT GCTGGGTTCG CACGACGCCA AACTTCTTGC CGAGGCGGAA
GCGAAGAAGG CCGACACCGT AACCCTGATC GTCTCGACCG AGGAGGATGA GGCGAAGGAG
GTCGCCGGCG ACCTGACCGG TCTCGGCGCC ACCGTCACCG AACGGTACGA CAGTATCGGC
TACGTGCTGG CCACGGTCCC GACCGGCAAG GTGATCGAGG CCGCCACGCT GCCCGGTGTC
GCCGCCGTCG ACCTGGACGA GACGATCCAG CTCTCGGACC CGCGGCCGGT GACCAACGGC
CAGCAGGCCG CCAAGCAGGG CAGCACGCTC AGCGGTCCCG GTGACGACAC CCGCGCGGAC
AACCCCTACA TGCCCTCCGG TGAGATCGGC GCCGTCAAGT TCGTCGACCA GAATCCCGAA
TGGGACGGCC GGGGGATCAC CATCGGCATC ATGGACTCCG GTGTGGATCT GGACCACCCG
GCGCTCCAGC ACACCACCAC GGGCGAACGG AAGATCGTCG ACTGGGTCAC CGCGACGCAC
CCGTTCGAGG ACGCCACCTG GCGCCCGATG ATCACCGAGG TCACCGGCCC GGCGTTCGAG
TCGGCCGGCG TGACCTGGAC GGCTCCGGAA GGCACCTACC GCTTCAACAC CTTCCGGGAG
GTGATCACCA CGGGCAGCGA GCTGCTCGGC GACGTCAACC GGGACGGTGA CACCACCGAC
GAGTGGGGCG TGCTCTACGA CCCCGCCACC AACGACATCC TGATCGATGT CGACCTCGAC
GGAGACTTCA CGGACGAGAC CGTTATGCGT CCGTACCAGG AGCGGTTCGA CATCGGCCAC
TTCGGCACGG ACGAACCGTC AACCGCCGTC CGCGAGCAGC TGCCCTTCGT GGTCGAGTTC
CGTGAGGACG TCGACACCAC CCCGGTCGGC GGCCCCGGTC TGGTCGACTA CGTCAACATC
GGCATCGTCT CGGACGCGCA CGGCAGCCAC GTCGCCGGCA TCACCGCCGC CAACGACATG
CTCGGCAACG AGGTGTTCGA CGGCGCCGCG CCCGGCGCCA AGATCGTGTC GTCCCGGGCC
TGCTCCTGGG GAGGTGGCTG CACCTTCGCG GCGCTCACCA CCGGCATGGC CGACCTGGTC
ATCAACCGGG GCGTCGACGT CATCAACATG TCGATCGGCG GCCTGCCGGC ACTCAACGAC
GGCAACAACG CCCGCGCCGA GCTGTACAAC AACCTCATCA CCACCTACGG CGTCCAGCTC
GTCATCTCCG GCGGCAACTC CGGCCCCGGC CTGAACACCG TCGGCGACCC GTCGGTCGCC
CAGAACGTCG TCAGCGTCGC CGCCAGCATC AGCAAGGACA CCTGGTTGGC CAACTACGGC
TCGGTGGTGC GGACGAAGAA CGCGCTGTTC AACTTCTCGT CCCGGGGCCC GCGGGAAGAC
GGCGGCATCA AGCCGAACGT CGCCGCTCCC GGCTCGGCGA TCTCCACCAT CCCGCTCTGG
CAGGCGGGTA GCCCGGTCCC CGAGGCCGGC TACTCCCTAC CGCCGGGCTA CGGCATGTTC
AACGGCACCT CGATGGCCTC GCCGCAGGCC GCCGGCGCCG CCGCGCTGCT GCTGTCGGCC
GCTCGGGCGA CCGACCGCGG AGTCACCCCG CAGATGCTGC GCCGCGCGCT GTACAGCTCG
GCAAAGCCGA TCAAGAACGT TCCCACGTAC GGTCAGGGCT ACGGCATGGT GAACGTGCCG
AACGCGTGGA AGCTGCTCCG CAAGGGTGTG CAGACCCGCT CGTACACCTC GGAGGCGCCG
GTCTGCACCG TGCTCTCCGA CCAGCTGGGA ACGCCGAACC GCGGTACCGG CGTCCACAAC
CGGTGCGCCG CCGGGGAGGG GGGACACCGG ATCGGCAAGA AGAAGACCTA CCGGGTCAAG
ATCACCCGCA CCAGCGGTCC GACCGGCACC ATCAAGCACA ACATCGCGCT GCGCGGCAAC
GACGGCACCT TCCGGGCGCC GAAGTCCGTC GCGCTGCCAC TGAACCGGAC CGTCACCGTC
ACCGTCGTCG CCCAGCCGGA CGCCGGGGCG CACGGGGCGA TCATGACCGT GGATGACCCG
GCGACCAACA CGATCGACTT CGAGGTCTCC CTCGTGGTCG TGGCCGCCAA CGACACCCGC
AAGCCGAACT TCTCCTTCTC CGCAGAGGGC TCGGTGAACC GGAACGGCAC CACGTCATAC
TTCGTGACCG TGCCGCCGGG TACCGGCGCG CTCCAGGTGA ACCTCGACGG GATCGCCACC
GGCTCGCAGA CCCGGTTCAT CGCGTTCAAC CCGTACGGCG TGCCGACGGA GAGCACCTCC
AGCCGGGTCT GTTTCACCAA CTACTCCGAC CCTGACACCT GCAAGCCGCA GGAGCGGGAC
TACCAGAGCC CGACCCCGGG TGTCTGGGAG ATCCAGGTGG AGTCGCGTCG CACCTCGCCG
TCGCTGAACA ACCCGTACCA GCTGACGGCG CGGATCCAGG GAGTCGCGTT CGAGCCGGCC
GTGGTCGACC TGCCGGCCGT TGACGCCGGC GCGGCGACCC CGGTCGAGTG GAGCCTGACC
AACACCTTCG GCCCGGTCAC CGTCACCGGC CAGGGTGGTC CACTCGCCAG TGTCCACACC
GAGCGGCCGA CGATCGCCGA GGGCGCCGCG GAAGAGTTCT TCGTGGAGGT CCCGGCCGAC
GCGGCCGAGT TCACGGCCCG GATCGGCAAC CCGGCGAACG CCGCCGCCGA CCTGGACCTG
TACGTCTTCC GGGGCACCTC TCTGCTCGGC TCCTCCGCCG ACGGAGACTC GGAGGAGGCG
GTGACCCTCA CGAACCCGGC ACCGGGCACC TATCGGGTCG TGGTCGAGGG GTACTCGGTG
GACGGCGTCG GCGGCAGCAC GGCGTACGAC TACCTGGACT CCTTCTCCGC CGCGGCGCTC
GGCACCCTGT CGGCGCCGTC GAGTCCACTG GCCCTGGGCA GCGGCGACAC CGGTTCCCTC
ACCGGCACGG TGACCGCCCA GGGTGGCCCG GCCGCCGGCC GGGAGCTTCA GGGTGAGCTG
ACCTTGGTGA CGTCGGAGGG TGCGGTCGTC GGCCGTGGCG CCGTCGCCAT CGGCTCGGTG
AACTGA
 
Protein sequence
MSKPRNLSRR TSAGLFASVM AASAVTVAGG ATTASAEPAT PTAPVEVLGS HDAKLLAEAE 
AKKADTVTLI VSTEEDEAKE VAGDLTGLGA TVTERYDSIG YVLATVPTGK VIEAATLPGV
AAVDLDETIQ LSDPRPVTNG QQAAKQGSTL SGPGDDTRAD NPYMPSGEIG AVKFVDQNPE
WDGRGITIGI MDSGVDLDHP ALQHTTTGER KIVDWVTATH PFEDATWRPM ITEVTGPAFE
SAGVTWTAPE GTYRFNTFRE VITTGSELLG DVNRDGDTTD EWGVLYDPAT NDILIDVDLD
GDFTDETVMR PYQERFDIGH FGTDEPSTAV REQLPFVVEF REDVDTTPVG GPGLVDYVNI
GIVSDAHGSH VAGITAANDM LGNEVFDGAA PGAKIVSSRA CSWGGGCTFA ALTTGMADLV
INRGVDVINM SIGGLPALND GNNARAELYN NLITTYGVQL VISGGNSGPG LNTVGDPSVA
QNVVSVAASI SKDTWLANYG SVVRTKNALF NFSSRGPRED GGIKPNVAAP GSAISTIPLW
QAGSPVPEAG YSLPPGYGMF NGTSMASPQA AGAAALLLSA ARATDRGVTP QMLRRALYSS
AKPIKNVPTY GQGYGMVNVP NAWKLLRKGV QTRSYTSEAP VCTVLSDQLG TPNRGTGVHN
RCAAGEGGHR IGKKKTYRVK ITRTSGPTGT IKHNIALRGN DGTFRAPKSV ALPLNRTVTV
TVVAQPDAGA HGAIMTVDDP ATNTIDFEVS LVVVAANDTR KPNFSFSAEG SVNRNGTTSY
FVTVPPGTGA LQVNLDGIAT GSQTRFIAFN PYGVPTESTS SRVCFTNYSD PDTCKPQERD
YQSPTPGVWE IQVESRRTSP SLNNPYQLTA RIQGVAFEPA VVDLPAVDAG AATPVEWSLT
NTFGPVTVTG QGGPLASVHT ERPTIAEGAA EEFFVEVPAD AAEFTARIGN PANAAADLDL
YVFRGTSLLG SSADGDSEEA VTLTNPAPGT YRVVVEGYSV DGVGGSTAYD YLDSFSAAAL
GTLSAPSSPL ALGSGDTGSL TGTVTAQGGP AAGRELQGEL TLVTSEGAVV GRGAVAIGSV
N