Gene Strop_0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0856 
Symbol 
ID5057299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp959076 
End bp960659 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content67% 
IMG OID640473125 
Productcarboxyl transferase 
Protein accessionYP_001157711 
Protein GI145593414 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0690985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTACCG AGACCGGGAC CAACATCCAC AGCACCGCGG GCAAGCTGGC GGATCTGGAG 
CGTCGGATCG ACGAGGCGGT GCACGCCGGA TCGGCGCGCG CCGTGGACAA ACAACATGCA
CGGGGCAAGA AGACCGCACG GGAGCGGATC GAGCTGCTCC TCGACCCGGG CTCCTTCGTC
GAGCTGGACG AGTTGGCCCG ACACCGGTCC ACCAACTTCG GACTGGCGAA GACCCGCCCC
TACGGCGACG GCGTGATCAC CGGTTACGGG ACCATCGACG GTCGCCAGGT CTGCGTCTTC
GCGCAGGACT TCACGGTCTT CGGCGGCTCC CTCGGCGAGG TCTTCGGCGA GAAGATCGTC
AAGGTGATGG ACCTGGCCAT GAAGATCGGG TGCCCGGTCA TCGGGATCAA CGACTCCGGC
GGTGCCCGAA TCCAGGAGGG CGTCGCCTCG CTCGGCCTCT ACGGCGAGAT CTTCTTCCGC
AACGTACGGG CCAGTGGCGT CATCCCCCAG ATCTCGCTGA TTCTGGGCCC GTGCGCGGGT
GGCGCCGTCT ACTCGCCGGC GGTCACCGAC TTCACCGTGA TGGTGGACCA GACCTCACAC
ATGTTCATCA CCGGCCCGGA CGTGATCAAG ACCGTCACCG GTGAGGACGT CGCCATGGAG
GAGTTGGGCG GCGCCCGTAC GCACAACTCG CGCAGCGGCA ACGCGCACTA CCTCGCCACC
GACGAGGAGG ACGCCATCGA GTACGTCCGG TCGCTGCTGT CGTACCTGCC GTCGAACAAC
CTGGACGAGC CGGTCACGTA CCCGATCGAC GTGGACCTCG ACATCAGCGA CGAGGACCGG
GAGCTGGACA CCCTCATCCC GGACTCGGCG AACCAGCCGT ACGACATGCA CCGGGTCATC
GAACACGTCC TCGACGAGGG CGAGTTCCTC GAGGTACAGC CGCTGTACGC GCAGAACCTG
ATCGTCGGCT ACGGCCGGGT CGAGGGCCGT CCGGTCGGTG TGGTCGCGAA CCAGCCCATG
CACTTCGCCG GCACTCTGGA CATCGCAGCG TCGGAGAAGG CCGCGCGCTT CGTCCGCACC
TGCGACGCGT TCAACATCCC GGTGCTCACC TTCGTGGACG TGCCCGGCTT CCTCCCCGGC
ACCAGCCAGG AGTGGGAGGG CATCATCCGT CGGGGCGCGA AGCTTATCTA CGCGTACGCC
GAGGCCACCG TCGGAAAGGT CACCGTCATC ACCCGCAAGG CATACGGCGG GGCGTACGAC
GTCATGGGCT CCAAGCACCT CGGCGCGGAC CTGAACTTCG CCTGGCCGAC CGCCCAGATC
GCGGTGATGG GGGCCCAGGG TGCGGTCAAC ATCCTGCACC GGCAGGAGCT GGCCAGCGCT
GCCGACCCGG CGGCGCGGCG CGCCGAGCTG ATCACTGAAT ACGAGGACAC CCTCGCCAAC
CCGTACATCG CCGCCGAGCG CGGGTATGTC GATTCGGTCA TCCCGCCGCA CGAGACCCGG
GCACAGATCG TCCGCGCGCT GCGGGTGCTG CGCACCAAGC GCGAGACCCT TCCCCCGAAG
AAACACGGCA ACATCCCGCT GTAG
 
Protein sequence
MTTETGTNIH STAGKLADLE RRIDEAVHAG SARAVDKQHA RGKKTARERI ELLLDPGSFV 
ELDELARHRS TNFGLAKTRP YGDGVITGYG TIDGRQVCVF AQDFTVFGGS LGEVFGEKIV
KVMDLAMKIG CPVIGINDSG GARIQEGVAS LGLYGEIFFR NVRASGVIPQ ISLILGPCAG
GAVYSPAVTD FTVMVDQTSH MFITGPDVIK TVTGEDVAME ELGGARTHNS RSGNAHYLAT
DEEDAIEYVR SLLSYLPSNN LDEPVTYPID VDLDISDEDR ELDTLIPDSA NQPYDMHRVI
EHVLDEGEFL EVQPLYAQNL IVGYGRVEGR PVGVVANQPM HFAGTLDIAA SEKAARFVRT
CDAFNIPVLT FVDVPGFLPG TSQEWEGIIR RGAKLIYAYA EATVGKVTVI TRKAYGGAYD
VMGSKHLGAD LNFAWPTAQI AVMGAQGAVN ILHRQELASA ADPAARRAEL ITEYEDTLAN
PYIAAERGYV DSVIPPHETR AQIVRALRVL RTKRETLPPK KHGNIPL