| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0844 |
|---|
| Symbol | |
|---|
| ID | 5057287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 945404 |
|---|
| End bp | 945928 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640473113 |
|---|
| Product | DoxX family protein |
|---|
| Protein accession | YP_001157699 |
|---|
| Protein GI | 145593402 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4270] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.450101 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.144011 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCATA TCTTGCCGTT GACAAGATCC TCGAACCGAG GCAGTCTTGT CGCCGACAAG
ATCTCGCTGG AGGTTCCGAT GGTTCCACTG ATCACACTGG GGGCCGGCAC CGGGTTGGCC
CGGCTGGCCG GCCTGGCCGG GGTGGGCGCG CTCGACGGCT GGCACCCCGC CCTGCGGGTG
GGACTCGCCC TGATGCTCAC GGTCACCGGA CTGGCGCACT TCAGCGCCCG GCGCCGGTCC
GGCCTCGTCG CGCTGGTGCC ACCACGGCTG CCCCACCCCC AGTTCCTGGT AACCCTCACC
GGAGTGCTGG AGTTGCTCGG CGCGGCGGCG CTACTCGCTC CCGCCACCGC TCGGTGGGCC
GCCGCCGGGC TGGCCGTCCT GATGCTCGCC ATGTTCCCGG CGAACGTGTC GGGGGCACGG
CGGAAGCTCA CCCTGGCCGG CCGCCCAGTC ACCCCGCTGC CCGCCCGTAC CGCGATGCAG
GCAACGTTCG TCGCCGCAGC GGTCGCGATT TCGCTTGGAT CCTGA
|
|---|
| Protein sequence | MEHILPLTRS SNRGSLVADK ISLEVPMVPL ITLGAGTGLA RLAGLAGVGA LDGWHPALRV
GLALMLTVTG LAHFSARRRS GLVALVPPRL PHPQFLVTLT GVLELLGAAA LLAPATARWA
AAGLAVLMLA MFPANVSGAR RKLTLAGRPV TPLPARTAMQ ATFVAAAVAI SLGS
|
|---|
| |