| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0762 |
|---|
| Symbol | |
|---|
| ID | 5057204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 845134 |
|---|
| End bp | 846120 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640473030 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001157617 |
|---|
| Protein GI | 145593320 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGA CTCGCACTCC GGTCGCCACC GGCACCCCGG ACCGTCGGGC ACGTCGACTG
CCGCGATGGA GTCTGCCCGC CCTCGGGGCC CTGGGCCTGG TGGCGGCGGT GACGCTACCG
TGGCTGGTCA ACGGGTACGT GATCGCGCTC GCCGCGACCG CTCTGGTCAT GGCCGTGCTC
GCGATGAGCG CCCAACTGTT GGTGGGTTGG GCCGGGCTGT CGCCGTTGGG GCAGGCTGGC
TATCTGGTCG TCGGCGCGTA CACCGCCGCG AGCGTCGCAA CGTTGACCAA CCTTGGCCCG
GTCCAGCTGC TCGCGGCCAC CGCAGCTGGG GCGATCGCCG CCGCCGTCAC CGGCTGCCTG
GCGGTACGGG CCCGTGGTAT CCCCTTCCTC ATGGTCACCT TCGGCCTGGG TGAGCTGGTC
CACGCTGCCG CCAACCAATG GGCTCCCGGC GGCAGCGAAG GCACCCACAC CTCGCCCGTC
GTCGCACTGC CCGGCCTGCC GGCGATGGTC CGCCCCGGCT GGGTCTACCT GTATGTGCTG
GCCTGCACTC TGGTCGTCGG TGTTGCCGTG GCGATCCTCG TGCGGACCCG ATTCGCGCTG
CTCCTGCGGG GCATCGCTGC CCACGAGCCC CGGGTGCAGG CGGCCGGGCA CCACACCAAC
CGCCTACTGC TCGCCGCCTA CACGATTGCC GGTGGCATCG CTGGCGCGGC CGGCGCGTTG
ACCATCGCGG TCACCCGTTA CGTCTCACCT GCTGACGCTG CCATGGGTGT CTCCGCCCTC
GCGCTGGCCG CCGCCCTCAT CGGGTCGGGC AGCATGCTCG GTGCCGGCGC CGGGGCCGTT
CTCCTCGTCG CCGCCCGGGA CTGGGCCAGC GGGCTGCTCG GCGGCCACGG CCCCACCCTG
CTCGGCCTCT GCTTCCTCCT GTTGGCCTAC CTGCCTCGGC TTCGCCAGGC CGGCCGTACC
CTTCGACTTT CCCGGAGGCG GACGTGA
|
|---|
| Protein sequence | MSATRTPVAT GTPDRRARRL PRWSLPALGA LGLVAAVTLP WLVNGYVIAL AATALVMAVL
AMSAQLLVGW AGLSPLGQAG YLVVGAYTAA SVATLTNLGP VQLLAATAAG AIAAAVTGCL
AVRARGIPFL MVTFGLGELV HAAANQWAPG GSEGTHTSPV VALPGLPAMV RPGWVYLYVL
ACTLVVGVAV AILVRTRFAL LLRGIAAHEP RVQAAGHHTN RLLLAAYTIA GGIAGAAGAL
TIAVTRYVSP ADAAMGVSAL ALAAALIGSG SMLGAGAGAV LLVAARDWAS GLLGGHGPTL
LGLCFLLLAY LPRLRQAGRT LRLSRRRT
|
|---|
| |