| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0725 |
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| Symbol | |
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| ID | 5057166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 808967 |
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| End bp | 809866 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640472992 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001157580 |
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| Protein GI | 145593283 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.688218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.288059 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATTG ACGCGAGAGC CGGCAGCCGA CCGAGACGAG ACGCGAGTCG TCGCGGTGTG
GCCCGCCGCA GCCGGTCGAC GGGCGGCAGC CCGGACGGGC CCGAAGGGCA GGACGAGCAC
GTACCCCTGC CGGAACCGGT CACCATGCGG CTCGACGGGA GGGTGGCGTT GGTAACCGGA
GCCGGCAGCC CGGACGGTAT CGGGTACGCG ACCGCCCGTC GCCTCGCTGA CCTGGGCGCG
CGGGTCGCCA TCGTCTCCAC CACTCGCCGC ATCCACGAGC GGGCCGGCGA ACTGGGGGTC
ACCGGATTTG TGGCTGACCT TACCGACGAG TCGGAGGTCG GTGCGTTGGC GGACGCGGTC
ACCGAGCAGC TCGGTGACGT GGAGGTGTTG GTCAACAACG CTGGCTTGGC GAGTCGGGCG
AGTCCGGAGG TACTGCGGCC GGTCGCCCAG CTCAGCTACG AGGAGTGGCG CGGTGAGATC
GATCGCAACC TCACCACAGC CTTCCTGTGC AGCCGGGCCT TCATCGGCGG GATGGCCGAG
CGGGGTTGGG GCCGGATCGT CAGCATGGCG GCGACCTCCG GCCCGGTCAA TGCCTTGCCG
ACGGAGGCCG CCTATGCGGC AGCCAAGGCT GGCGTCGTCG GGCTGACCCG GGCGTTGGCG
ATGGAGATGA TCGCTGACGG GGTGACCGTC AACGCGGTGG CCCCAGGGAC CATCCACACC
GCCGCGTCTA CGATTGCCGA GCTCAAACAA GGACTGGGCA CACCGGTCGG ACGGCCGGGT
ACGCCGGACG AGGTGGCGGC GTCCATCGCG TTCCTCTGCT CGCCGGCTGC CTCGTACATC
ACCGGCCAGA TGCTGGTGGT GGACGGCGGC AACAGCGTGC GCGAGGCGCA GTTCCGCTGA
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| Protein sequence | MAIDARAGSR PRRDASRRGV ARRSRSTGGS PDGPEGQDEH VPLPEPVTMR LDGRVALVTG
AGSPDGIGYA TARRLADLGA RVAIVSTTRR IHERAGELGV TGFVADLTDE SEVGALADAV
TEQLGDVEVL VNNAGLASRA SPEVLRPVAQ LSYEEWRGEI DRNLTTAFLC SRAFIGGMAE
RGWGRIVSMA ATSGPVNALP TEAAYAAAKA GVVGLTRALA MEMIADGVTV NAVAPGTIHT
AASTIAELKQ GLGTPVGRPG TPDEVAASIA FLCSPAASYI TGQMLVVDGG NSVREAQFR
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