Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0612 |
Symbol | |
ID | 5057053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 692079 |
End bp | 693851 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640472882 |
Product | periplasmic component of the Tol biopolymer transport system-like protein |
Protein accession | YP_001157470 |
Protein GI | 145593173 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGGTT CCGCGGGTAT GCTTTCGCAA CCGGGACGGG TGCGTGGCCC GACGTTCCAG TTGCACAGGC TCGCCGAAGA CCCGGCCGGG GCAGGCGACG GGGCGATCTC GCCGGACGGC ACGCGCTTTG TCGCCTCGTC GCGGCGCACG GGATCGCTCA ACCTCTGGTT CTACGAGATC GCCACCGAGC AGTGGCACCA GGGCACACGC GGCGCGGGCG ACGACATCGA GGCCCAGTGG TCACCCGACT CCGCCTGCCT CGCGTTTACC TCCTCGCGCT GCGGGCACAA GGCGGTCTGG CTGTATCGGT TACACGAAGC GCGGATCAGC AGGCTCACAT TCGGCCCATA CGACGAGGAG TATCCGAACT GGTCGCCGGA CGGCTCTAAG ATCACCTTCG TTGGGGGTGG CTGGGCACAG CGGCAGGTTT ACCTGGTGTC CGCCACCGGC GGGCCACCCA TGCCGGTGAC CGACGAGCCC GGACGGACGG GTGCGTGCAC CTACCTGCCC GACGGCAGCG GCCTCATCTG CCACTCCTAC GACACTGGCG CCAGCGCGGT GTCGATCCTG CCGCTAGACG GCAGTATGCC ACGACAGGTA ACCGACGGCA GCACGTGGGA CTACAAACCG ACCGTCTCGA GTGCGCACCC GGTAGTGGCG TTCTCCCGAA GCCTCGAGGG ACGCTCAGTG ATCTGGGTGC AGCAGCTTGC CGAGCCGTAC CGCGGGCGCG CGCTGGTCGT GGAAGCAGGC GACGACCGGT GGCCGAACTG GACCGCGGAC GGCCAGCACC TCTTCTTCCA TCGGCTCGTC GACCGCGGGG TCGGCATCTG GGTGCTCGAC CGCCGCACCG ACACGGTCAC CCAAGTCGTT GGGCCAGACG AACAGCCAAG GTACGGCAAT ATCTCCCCCG ACGGCACCCG GCTGATCTAC GCCGCGGAGG AAAGCGGCCG GTCCGTGGTG AAGGTTCGCG AGATCAGCGG CGGGTTGACC AAGGTGCTCC CGCTCGGAGA CGCGGCGTTT CCGCAGTGGT CTCCGAACGG TCGTACTGTC GCCTATCTCA CGCGGGATGT GAGCAGACCG CGGTGGGAGA TCGCGACCTA TGACCTCGCC ACGGCCACGA GCACCGTGTG GACCTGCGGC GTCACATGGC CCAAGAGCCT GCATGGGCCG CTGGACTGGT CACCGGACAG CACCCGGCTC GTCTTCAGCA CAGACACTGA ACCGTTCGAG GCGGATCTGT GCGTCCTGGA CCTCCGGGAC GGCAGCGTCA CCAAGCTCAC CGAGGACCCC TGGTGGGACG AGGCACCGTC ATGGACACCG GACGGCACGG GTGTCGTTTT CCTCTCGACC CGCGGCGGTG ACTGGACCTG GGGCTTCTAC CGCATGGACC TGAGTACCGG TGAGATCCAT GCTCTTGCCC GCCCGGACTA CATCGAGAAG AACAACCCCC GCATGCTGCC CGACGGCACG CTCATCTACT CCCTTGCCGT TTCCGGCATT GAGGATCTGT TCGAGCAGCT GCCCGACGGA CGTGGGCGCG TGCTCTCGTC GGTCGGGCCC GCTGTCCGCT ACCCGGTACC CAGTCGGGAT GGCTCGATGC TCGCGTTCAC CCGCACACAC CGCACCGTCG AGTACTGGCT GGCAAAAAAC GTGTGGGGTG CGGGCTCCCC CATCGCGGAC CTGGCCGACG GTGATGCGCG GCGACGCGGC ACCCATGGCC CACAGACCCG CACCGGACCG GTGCGCAGTC CGGTTAACAC GCGCCGCAGA TGA
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Protein sequence | MNGSAGMLSQ PGRVRGPTFQ LHRLAEDPAG AGDGAISPDG TRFVASSRRT GSLNLWFYEI ATEQWHQGTR GAGDDIEAQW SPDSACLAFT SSRCGHKAVW LYRLHEARIS RLTFGPYDEE YPNWSPDGSK ITFVGGGWAQ RQVYLVSATG GPPMPVTDEP GRTGACTYLP DGSGLICHSY DTGASAVSIL PLDGSMPRQV TDGSTWDYKP TVSSAHPVVA FSRSLEGRSV IWVQQLAEPY RGRALVVEAG DDRWPNWTAD GQHLFFHRLV DRGVGIWVLD RRTDTVTQVV GPDEQPRYGN ISPDGTRLIY AAEESGRSVV KVREISGGLT KVLPLGDAAF PQWSPNGRTV AYLTRDVSRP RWEIATYDLA TATSTVWTCG VTWPKSLHGP LDWSPDSTRL VFSTDTEPFE ADLCVLDLRD GSVTKLTEDP WWDEAPSWTP DGTGVVFLST RGGDWTWGFY RMDLSTGEIH ALARPDYIEK NNPRMLPDGT LIYSLAVSGI EDLFEQLPDG RGRVLSSVGP AVRYPVPSRD GSMLAFTRTH RTVEYWLAKN VWGAGSPIAD LADGDARRRG THGPQTRTGP VRSPVNTRRR
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