Gene Strop_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0606 
Symbol 
ID5057047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp686736 
End bp687437 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content64% 
IMG OID640472876 
Producthypothetical protein 
Protein accessionYP_001157464 
Protein GI145593167 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCC CAAAGATCGA AATCACGGTC GACACCACCG TCGACGCCGC GTGGCAGGCA 
TTACGGGACA CCGAGACCAT CCGCCGGTGG CACGGCTGGG ATACCGACGA GATCGCCGAG
GAAATCCGAT CTATCTACTT CACCGACGTG ACCGTAGACG ACCAGAGACA CGTGCTCGTC
GCCAACGGCG GCGATCGGTT CGAGGTACAC CCGCTGCCCG ACGGCGTGCG CGTCACGCTC
ACCCGTGCAC CCCTGTCCGG CGATCCGAAC TGGGACGCCT ACTACGACGA CATAACCGAG
GGCTGGACAT CATTCCTACA ACAGCTACGC TTCCTACTCA GCCACAACCC CGGCGGTATG
CGACGCACAC TCTTTTTTTC CTACCGGGGC GTTGACTCCA GCACCATCGT CGACCGGCTG
GGTCTGGCCG GCATCGCGGC GACACCGGCT GGCAGCCCCT ACACCGCCAC CGTCGCAGGC
GGCACGACGA CAGGCAACGT CTGGTTCCGG TCGACCCACC AACTCGGCCT GACCATCGAC
GCCTGGGGAC CAGGGCTGCT GGTACTCGCA GGAAACACAC CGTCGCAGAC CAATCCAGCG
GGCACCGCAA CGGCCCTCCT CAGCACCTAC GACCTCGACG ACACCGCGTT CGACCAGCTC
TCCCAGCAAT GGTCAGCCTG GTGGGCCACG CACACACACT GA
 
Protein sequence
MNTPKIEITV DTTVDAAWQA LRDTETIRRW HGWDTDEIAE EIRSIYFTDV TVDDQRHVLV 
ANGGDRFEVH PLPDGVRVTL TRAPLSGDPN WDAYYDDITE GWTSFLQQLR FLLSHNPGGM
RRTLFFSYRG VDSSTIVDRL GLAGIAATPA GSPYTATVAG GTTTGNVWFR STHQLGLTID
AWGPGLLVLA GNTPSQTNPA GTATALLSTY DLDDTAFDQL SQQWSAWWAT HTH