Gene Strop_0598 details

Gene Information

• Locus tag: Strop_0598
• ID: 5057039
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salinispora tropica CNB-440
• Kingdom: Bacteria
• Replicon accession: NC_009380
• Strand: +
• Start bp: 673313
• End bp: 679168
• Gene Length: 5856 bp
• Protein Length: 1951 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 640472868
• Product: beta-ketoacyl synthase
• Protein accession: YP_001157456
• Protein GI: 145593159
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG3321] Polyketide synthase modules and related proteins

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGGGCGA TCGAACGGCA GATCGCGGTG GTCGGCATGG CCTGCCGCTA TCCCGACGCC 
GACGATCCAA CGCAACTGTG GCGCTCGGTG CTGGCCCGCC GCCGCGCGTT CCGCGCCATC 
CCGGCTGAGC GGCTGGACCC CGAGCACCGA CTTGGAGCGC CGCACGCGCC GGACTCGACG 
TACGTCCGCC GCGCCGCACT GCTGCGGGAC TGGCACTTCG ATCGCGAGGC CTTCCGCGTG 
TCCGGGTCGG CATGGCGGGC CGCCGATCAC GCGCACTGGC TTGCGCTTGA GACGGCGCGG 
GCAGCCCTGG CAGACGCCGG ATTCCCCGGC GGCGCTGACC TGGACGCCGA CCGGGTCGGC 
GTTGTTCTCG GCAACTCGCT CACCGGCGAG TTCAGCAGGG CCGGAATGGT GCGGATGCAC 
TGGCCGTTCG TACGGCGATC GGTAGAGGCC GCCCTACGCG ACACCAGAGT GGATTCCGCG 
GTCACCGCGC AGGTACTCGA GCACGCCTGG CATCACATCA CGGCGGCGTT CCCGGACCCG 
GGCGACGAGT CACTGGCAGG GGCACTGAGC AACACCATCG CTGGACGGAT CTGCAATCAC 
TTTGACTTTC ACGGTACCGG CTACACAGTA GATGGCGCCT GCGCGTCGAG CCTGCTGGCC 
GTCATCACCG CGGCCAACGC GTTGCTCTCC GGCGAGCTCA ACTTCGCCCT CGCCGGTGGC 
GTCGACCTGT CTCTGGACCC GCTTGAGATG ATCGGCTTTG CCCGCCTCGG CGCGCTCGCC 
CACGGTCAGA TGCGCGTGTA TGACGAGCAA CCGACGGGCT TCCTTCCGGG GGAGGGATGC 
GGAATCGTCG CCCTCATGCG CGCCGACGAG GCACAGCGGC GCGGACTTCG TGTCTACGCG 
AGGCTGACCG GCTGGGCAAC GTCCTCGGAC GGGTCCGGGG GCCTGACCCG GCCGGACACG 
AGCGGACAGG CGCTGGCGCT GCGGCGCGCG TACCAGGCGG CCGGAGTGAA GCCAGAACAG 
GTCGGCCTGA TCGAGGGGCA TGGCACCGGA ACTGCTGTCG GCGATCGGGT CGAGCTGGAA 
ACGCTGACCC AAATCCGGCG CGATGCGACC GGTACCGCTG TGCTCGGCTC CGTGAAGGCA 
AACATCGGGC ACACCAAGGC GGCCGCTGGC GCGGCGGCAC TGATCAAGAC CGTTCTCGCC 
GTGTATCACC GGACCCTTCC GCCGACCACG GGCTGCCACA CACCGCACCC CCTCCTTCGC 
GAGGCGGACG CCACATTGCG AGTGCTCGAC GAGCCGGAGC CGTGGCGGGG CGAGCGGCTG 
ACAGCCGGCG TCTCCGCGAT GGGGTTCGGC GGGATTAACA GCCATGTCGT GGTGGAAGGC 
AGTGCGCCCG GTGTCGCTGC CAGTCACCGC CGGGCCTCCG TCTCGGCCCG GGCCTGGTCA 
CACCCCCCGA TCCAGCCGGA GATTGTGCTG CTCGAGGCCG CCGACCAAGG TGAGCTGACC 
GAGCGCCTCA ACCGTCTTGC CGACTGGGGG TCAATGCTAA GCGACGCCGA GGTCGGTGAC 
GTTGCGGCGA CCCTCAGCGC TGCGGCCGGC GGGACAGCCA GGATCCGCTG TGCCTTGGTA 
GCCCACGACG CCGACGAGCT GTCGGCAGCC GCCCGCGCCG CGACCGGGTT GCTAGCCACC 
TGGAACGGCC ATGTCCTGGT TGATGAGACC GCTGGAGTGG CATTGGGTGC TGGACCGCCG 
GCACGAGTGG GGCTGCTCCT GCCCGGCCAA GGCGCCCCTG TGCGGTACGA CCCTGGCCCG 
CTGGCCCGGC TGCTGCCCGA GCTGCCTGAG CGGCCCGCGG ACACCGGGGC GACCGGCACC 
GAGGCGGCAC AACCGGCCGT GGTGTGGCAG TCAATGCTTG GCCTGGCGTG GCTGGACCAG 
CTCGGCTGCG CCCCACTTGG CGCCGTTGGA CACAGCCTCG GCGAGTTGAC CGCCCTTGCC 
TGGGCAGGTG CGTTGGACAT GGACCGGCTC GTCCAGTTGG CTGTCGTCAG GGGGCGCGTG 
ATGGCACGGC ACGGCGTGGC GGGCACGGGC ATGGTGAGTC TGTCCCTCGA CGAGGCGCGG 
GCGGTCCGGC TGGCCAACGA GCACGGGCTC GTGGTGTCGG CCCTCAACGC CCCGGACCGT 
ACTGTGCTCG CCGGCGCCGA CGAGGACCTC GCCCGGTTGG AGGCGGTCCT GCGGGACAGC 
GGTATCGAGG CGATTCGACT ACCGGTCTCG TACGGCTTCC ACAGTCCGGC GATGGAACCT 
GCGCAGCCGG CGTGGGCTGC CGAGCTGAAC ATGGTCGGGT TCCCCCGACA GTCGTGGCCG 
GTCGTGTCCA GCGTTACAGG AGAGGCACTG CGCGACAGCG ACGACCTGGT GGCCCTGCTC 
ACCCACCAGC TCACCGCCCC GGTGCGGTTC CTCGCCGCAG CCCGCACCCT TGGCCAGCAG 
TGCGACCTGC TTGTCGAGGC AGGTCCGGGG ACCATGCTGT CCCGGCTGGC CGCCCGGTTC 
TCGGCAGCAC CGGCGGTGAG CCTGGACTGC GGGGGCCCGC CCCGTTCGCT TGCCCTCGCC 
ACCGCTGCGG TCGTTGCCGC TGGCGCAGGC GACATCGCCG CCTGGTACGC AGGGCGGCCC 
TACCGCCCTC TCCAGCCGGG AACGACGATG TCCTTTCTCA GCAGCCCGTG TGGTTCCGGC 
ATCTCTTCCG CCGGGTTGCT CGGGGCGGGG TCTGTGTCGA CCGATACGGA TCCCGTCCCT 
CTTCCGGGTC GGGTCGAGCA GCTGTCGAGC GTGGCAGCAG CGGTGGTGAG GACCGCCTCC 
GCTCGACCGG CGCCGACCCC ACCCGAGGCG GACCCGGCCG GGTCAGTAGA CCCGGCCGGG 
TCCGCTGCCA GCTCTCAGGA CCCACTCAGC CAGCTGCGCG CCCACCTCGC CACCGAGCTG 
GAACTTCCGG TGGCGAGCAT CACCCCGGCA AACAGACTCC TCGGCGACCT GCATTTGAAC 
TCGTTGCAGA TCGCCCGCAC CGTCGCCGCG GTCGCGTCGG CATTGGGCCG GCAACCACCT 
TCCGCGCCGC TGTCGCTGGC CGAGGCGACC GTCGCCGAGG CGGCGGAGGT GCTTGCCCAG 
TTGCCCGCCG GTGACGATGA GGAGGCACCG GTCCAGGGCG TAGCGCCGTG GATCCGACTG 
TTCCGGCACG ACTGGGCTCC GGTGGAGAAC ACTGTGACGG CCATCGGAGG CGTACGCTGG 
CGGGTCGCGG CACCGGAGGG CCACCCGTTG CATGCGGTCT TCCCTTCCGT GCCTGAGCAG 
ACAGCAGTGC CACACGGACT CGCTGTCGCG CTCGGCCCGG ATGATGGTCC GGTGGAGGTG 
GCTGCTGTCC TGACGCAGAT CGCTGTCGAG CAGCCGGCCC GACTGGCGCT CGTGCACGAC 
GGCCATCCCG CTGCCGCCGC CGTCGGCCGT TCGGTCGCGG CGGAACTCCC GGGCTGTGCG 
GTGACAGTGA TCAAGGCGAC ATCCCCTGCG GACATCGCCA GGCTGGCCGT GCTGGCTGTG 
CCGGCGGGGT ACGCGGAGCT ACGGATCGGG CCCCGCGGTG TCCAGCGGCT GGTCACCTCC 
CTGCACCGCC CGGCCGACGA CTCGCGCGAG ATACCGCTGG GCCCCGACGA CGTCTGTATT 
GTCACCGGTG GTGCCACTGG TATCACGGCC TTCGCTGCGG CGGCGATCGC CGAACGGACC 
GGATGCCGGC TGGTGGTCCT CGGGCGGCGA CCCGTCGAGG ACGCCGAGAC GAGCGAGGCG 
CTGCGGCGGC TGGGTGCGGT CCTCGGTGAC GACCGGCTGC ACTACGAGCG AGTCGACCTG 
ACCGATCCCG ACACGGTACA GGCAGCCGTG TCCCGCGCGG GTCGGCTCGG CGTGATCCGG 
GCGGTTGTGC ACGGCGCCGG GATCAACCGG CCGGCGCCGC TGACGCAGGT CTCGGAGGAG 
GAGCTTCAGG ATCACCTGGG CGGCAAGGTG GCCGGGCTCC AGTCGCTGCT CGCCGCCGCC 
GGGCCGGACC TGCGTCTGGT GCTGGCGTTC GGCTCCATCA TCGGCCGTCA GGGGTTAGCC 
GGGCAGGCCG CCTACTGTGT CAGTAACGAC TGGCTGCGAC ACGAGGTGGA ACGGTGGGCC 
AGCGAAAACC CAGCGGTTCG GGCGCACGTG ATCGAGTGGT CGGTCTGGTC CGGGATCGGT 
ATGGGGGTCC GCCTGGACGT GCTCGACTCG CTGCACAGGC GCGGGGTGGC CGGCATCGCC 
CCCGATGACG GCGTCGCGGC GCTGTGGCGA ATCCTCACTG ATCCGACCGC TCCGGTGACC 
GTGCTGTGTA CGGCGGCATT TCCCGAATCC GCCACGCTGA GCCCGGAGCC TGCGCCGGAT 
GCTCCAGATC TGGGCCGACT GCGCTTCGCT GAAGTCCCGG TCGGCCGGAT AGGACGGGTT 
GCCACGGTGA CCGAGGCGGT TCTGTCGGCC GGCGCGGACC CGTATCTGCG GGACCACCGT 
GTCAGTGACG TGCCGCTGCT GCCCGCGGTG CTGGGTCTGG AGGCGATGGT GCAGCTGGCG 
TCACTGACCA TCGGGAACCG AGCCGGTTGG GCGATCCGGG ATGTCAGCTT CGCCGCGCCG 
ATCGATGTAC CCGAGTTCGA CGTGAGGCGG ATTCGGGTGG CGGCGCTGGC TGCTGAGAGT 
GGCGCTGATG TCGCAGTGGT GATCCGCGCG GACACCGACG GTTTTGCCAC CGACCGGTTC 
AGCGGAACGG TGGTCGGGGA ACCTTCGGTG CCGCCGACCA CCAGCGCGGC GGGTGGTGGA 
CAGTCCCGGC CGTGCGCGCG GATGGGGGTA GCCGGACCGG AGGCGAACAC CATTCATTCT 
TGGTATGGGT CGGTGCTCTT CCATGAGGGA CAGATGCGTC GTCTTCTCTG CGCCGAGCCG 
GTCTCGGCGT TCGCAGTGCG CGCCGTGGTG GAGGCCGGTG ACCCGGAGCG CTGGTTCGCA 
TCGTTCCTCG GTCAGGACCT GCTGCTCGGC AGTCCGGGTG GGCACGATGC GGCGATTCAT 
TCGCTGCTCG CCTGTGCACC GCACCGTCGG GTGCTGCCGG TGGGCGCGGC CGAGGTGGTC 
GTCTGGCAGC CGCTGCGCGG TCGGCTCACA GTCGAGGCGC GCGAGGTGTG GCACAGCGCA 
GACGAGTACG TTTTCGACGT CGAAGTCACC CACTCTGGTG GGCCGGTGGC GCGGTGGCGG 
GGCCTGCGGC TGCGAGCGGT CGGCGAGAAC CCGGAGTTCA TGGCGGCCCG GGACTGCGGT 
CGACTTGGCG TGGAACTGGT TGGTCCATGG CTGAGTCGCC GGTTGATCGA GGTTGGTGCG 
GTCGACGCGG TTGAGTTCGT CGTGGGAGCC GGCCGGCGTG AGACGGAGGG TGCCCGCAGC 
CTGGTGGCTC GGCATCTCGC CCTGCCCGAA TCGGAGCTGG GCCACAAGCC GTCCGGCGCG 
CTGCGCGTGC CCGGCCGGTA CGCCAGCGCG AGCTACGCCG ACGGGCAGGT GCTCGTCGCG 
TTGGCCGACC GCCCGGTCGG GGTGGACTGG GAGCCGGTGA CGGACCGGTC CCTGGCGGGG 
TTGCTGGACT CCTCCGCGCG GGTGGCCGCG GAGGAACTCC GGCAGCGAAC CGGAGACACC 
CAAAAGGTGG CCACAACCCG GTTGTGGGCT GCCCGGGAGG CTCTGGTCAA GCTCGGCGTC 
GATCCGGATC AGGCGCTGGC GCACGGCGAG GCGGAGCCGG ATGGCGTGCT CGTCTCAACG 
GGGCGAGACG TGACGGTGAC GACCGCGTTG GCCTGGGGCG ACAGGACAAA TCAGGTGGCG 
GTGGCGGTGG CGACCAAATC GGGGCGACAT GATTAG 

 

Protein sequence

MRAIERQIAV VGMACRYPDA DDPTQLWRSV LARRRAFRAI PAERLDPEHR LGAPHAPDST 
YVRRAALLRD WHFDREAFRV SGSAWRAADH AHWLALETAR AALADAGFPG GADLDADRVG 
VVLGNSLTGE FSRAGMVRMH WPFVRRSVEA ALRDTRVDSA VTAQVLEHAW HHITAAFPDP 
GDESLAGALS NTIAGRICNH FDFHGTGYTV DGACASSLLA VITAANALLS GELNFALAGG 
VDLSLDPLEM IGFARLGALA HGQMRVYDEQ PTGFLPGEGC GIVALMRADE AQRRGLRVYA 
RLTGWATSSD GSGGLTRPDT SGQALALRRA YQAAGVKPEQ VGLIEGHGTG TAVGDRVELE 
TLTQIRRDAT GTAVLGSVKA NIGHTKAAAG AAALIKTVLA VYHRTLPPTT GCHTPHPLLR 
EADATLRVLD EPEPWRGERL TAGVSAMGFG GINSHVVVEG SAPGVAASHR RASVSARAWS 
HPPIQPEIVL LEAADQGELT ERLNRLADWG SMLSDAEVGD VAATLSAAAG GTARIRCALV 
AHDADELSAA ARAATGLLAT WNGHVLVDET AGVALGAGPP ARVGLLLPGQ GAPVRYDPGP 
LARLLPELPE RPADTGATGT EAAQPAVVWQ SMLGLAWLDQ LGCAPLGAVG HSLGELTALA 
WAGALDMDRL VQLAVVRGRV MARHGVAGTG MVSLSLDEAR AVRLANEHGL VVSALNAPDR 
TVLAGADEDL ARLEAVLRDS GIEAIRLPVS YGFHSPAMEP AQPAWAAELN MVGFPRQSWP 
VVSSVTGEAL RDSDDLVALL THQLTAPVRF LAAARTLGQQ CDLLVEAGPG TMLSRLAARF 
SAAPAVSLDC GGPPRSLALA TAAVVAAGAG DIAAWYAGRP YRPLQPGTTM SFLSSPCGSG 
ISSAGLLGAG SVSTDTDPVP LPGRVEQLSS VAAAVVRTAS ARPAPTPPEA DPAGSVDPAG 
SAASSQDPLS QLRAHLATEL ELPVASITPA NRLLGDLHLN SLQIARTVAA VASALGRQPP 
SAPLSLAEAT VAEAAEVLAQ LPAGDDEEAP VQGVAPWIRL FRHDWAPVEN TVTAIGGVRW 
RVAAPEGHPL HAVFPSVPEQ TAVPHGLAVA LGPDDGPVEV AAVLTQIAVE QPARLALVHD 
GHPAAAAVGR SVAAELPGCA VTVIKATSPA DIARLAVLAV PAGYAELRIG PRGVQRLVTS 
LHRPADDSRE IPLGPDDVCI VTGGATGITA FAAAAIAERT GCRLVVLGRR PVEDAETSEA 
LRRLGAVLGD DRLHYERVDL TDPDTVQAAV SRAGRLGVIR AVVHGAGINR PAPLTQVSEE 
ELQDHLGGKV AGLQSLLAAA GPDLRLVLAF GSIIGRQGLA GQAAYCVSND WLRHEVERWA 
SENPAVRAHV IEWSVWSGIG MGVRLDVLDS LHRRGVAGIA PDDGVAALWR ILTDPTAPVT 
VLCTAAFPES ATLSPEPAPD APDLGRLRFA EVPVGRIGRV ATVTEAVLSA GADPYLRDHR 
VSDVPLLPAV LGLEAMVQLA SLTIGNRAGW AIRDVSFAAP IDVPEFDVRR IRVAALAAES 
GADVAVVIRA DTDGFATDRF SGTVVGEPSV PPTTSAAGGG QSRPCARMGV AGPEANTIHS 
WYGSVLFHEG QMRRLLCAEP VSAFAVRAVV EAGDPERWFA SFLGQDLLLG SPGGHDAAIH 
SLLACAPHRR VLPVGAAEVV VWQPLRGRLT VEAREVWHSA DEYVFDVEVT HSGGPVARWR 
GLRLRAVGEN PEFMAARDCG RLGVELVGPW LSRRLIEVGA VDAVEFVVGA GRRETEGARS 
LVARHLALPE SELGHKPSGA LRVPGRYASA SYADGQVLVA LADRPVGVDW EPVTDRSLAG 
LLDSSARVAA EELRQRTGDT QKVATTRLWA AREALVKLGV DPDQALAHGE AEPDGVLVST 
GRDVTVTTAL AWGDRTNQVA VAVATKSGRH D