| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0568 |
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| Symbol | |
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| ID | 5057008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 638553 |
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| End bp | 640511 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640472838 |
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| Product | DNA-cytosine methyltransferase |
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| Protein accession | YP_001157427 |
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| Protein GI | 145593130 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0270] Site-specific DNA methylase
[COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.905473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAA ATACCGTCGA ACGGCGTCGG GCAGGCTACG GCGTCAAACT CGTACGTGGC
CCGTTCGTAC GCCTGGCGCC ACACCCCGAG GCATGCGAGA ACGACGACGA GTTCCTCCGC
TTCGCAAAAG CGTGCCGTGA GCGGGGCGAG CGGCTGGCAG CGGACCTGTT CAGCGGCGCG
GGTGGTCTGA GCCTGGGTCT CACCGAGGCC GGTTTCCGTG TGGTCCTGGC GGCCGACCGC
GACCCAGAGT CCGTCGAGAC ACATCGTCAT CACTACCCGG GCCTCACCCT CGACTACGAC
CTGGGAGAGT CCGCCAACAT CCGGCGAATC GCCGCTCTGG TCAAGGAGGC GGGGATCGAG
CTGCTGACCG GCGGCCCACC ATGCCAACCC TTCTCCCGAG CGGGCCGGTC ACTGATCCGT
CACCAGGTCC GTCACGGTCT CCGCCCGGCA CATGACGAAC GCCGGGACCT CTGGCACTCG
TTCCTGGAGG TCATTCAGCT GGCCACACCC GCCGCCGTGA TCATGGAAAA CGTCCCCGAC
ATGGCACTCG ATCGGGAGAT GTTCATCCTC CGCACCATGG TGCACGAACT GGAGTCGATC
GGTTACGCCG TCGAGGAACA GGTCGTCGAC ACCCTCCGTT ACGGCGTACC CCAGTTCCGC
CAGCGATTGA TCCTGGTTGC ACTGCGAGAC GGAGTCGCCT TCGACTGGCC GCCGGAGGTA
CCGGACCGGG TGTCGGTGTG GAACGCGATC GGCGACCTAC CCGAGGTCGA GGGCGGCTGG
AGGCCCGAGG GTGGTGCCGA CGGCTGGTCA GACTACACCG GCCCCGCTTC CGCCTTTCAG
AGGCAGATGC GTCAGGGTGT TGCACCGGTG GACACGGGCA AGGTCTTCGA CCACATCACC
CGGCCCGTAC GCGAGGACGA CCAGCGCGCC TTCGACATGA TGGACGCCGG CACCCGATAC
TCAGAACTGC CGGAGGACGT CAAGCGCTAC CGCGACGACA TCTTCGACGA CAAGTACAAG
CGCCTGAGCG AGGACACCTA CTCCCGCACT ATCACCGCGC ACATCGCCAA GGATGGCTAC
TGGTACATCC ATCCCCGACA GGACCGCACA CTGACGGTGC GTGAGGCCGC GCGGCTGCAG
ACCTTCCCCG ACTGGTTCCG CTTCGCCGGC CCACCGTCGG CCGCGTTCCG TCAGATCGGC
AACGCCGTAC CCCCGGCGCT GGGCACCCAG CTCGGACGCG CCGTGATGGC AGCGCTGGAC
GCCCTCAGGC CAACTCCGTA CCGCAGCCGC GACATAGCCC ACGCCCTCGC CACCTGGTTC
GACGACCTCA GCGAGCCGGC CCTCCCGTGG CTGCGCGCTC GGACACGGTG GCAGGTCATC
TCCGCGGAGA TGCTTCTCGA CCGGACAGCA CCCGAGCAGG TTCGAATCCT CTGGTCACTG
CTCGAACGAT GGGAGCAGCC ACAGGACACC GTCGACGCCG GCGACGAACT CGTCGAGATC
GGGCGGTGGA TCAACCGCGA GCACCGCGCG GAGCGGCTGC TCGAACTGGC GCGCACGCTC
ACCTCGCAAC CAGACCTGCT CGACGACTAC AAGATCCACA GCCTTCGCGG GGTCGACGCC
TCGGTGATCG ACCTTGCTGT CCTCGCGATC CCAACCCGCG ACGAAGACAA CGCGGAGGAA
CCCGTCCTCA TCACCAAGGG CACTCACCGC GTCGCCGCCC GCTTCACCGG CGAGCACGTC
GAACGCAGCC ACAGAATGAC AGCAGGGCGT CTGGCCGTTG CCCGAATGAT CGGCGATGAC
GCCGACGCGC GGCGAGCACA CCTCGGCCTG ATCGAGCTGG CCACCTCCGT CTGCCGCCCG
ACCGACCCTG CCTGCCCACG CTGCCCCCTC AACAGGGCAT GCAGCGAGGC TGCCAAACGG
GGCAGTCGGA TCGAACGGCA GCCGGTGGTC AGTCCCTGA
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| Protein sequence | MTENTVERRR AGYGVKLVRG PFVRLAPHPE ACENDDEFLR FAKACRERGE RLAADLFSGA
GGLSLGLTEA GFRVVLAADR DPESVETHRH HYPGLTLDYD LGESANIRRI AALVKEAGIE
LLTGGPPCQP FSRAGRSLIR HQVRHGLRPA HDERRDLWHS FLEVIQLATP AAVIMENVPD
MALDREMFIL RTMVHELESI GYAVEEQVVD TLRYGVPQFR QRLILVALRD GVAFDWPPEV
PDRVSVWNAI GDLPEVEGGW RPEGGADGWS DYTGPASAFQ RQMRQGVAPV DTGKVFDHIT
RPVREDDQRA FDMMDAGTRY SELPEDVKRY RDDIFDDKYK RLSEDTYSRT ITAHIAKDGY
WYIHPRQDRT LTVREAARLQ TFPDWFRFAG PPSAAFRQIG NAVPPALGTQ LGRAVMAALD
ALRPTPYRSR DIAHALATWF DDLSEPALPW LRARTRWQVI SAEMLLDRTA PEQVRILWSL
LERWEQPQDT VDAGDELVEI GRWINREHRA ERLLELARTL TSQPDLLDDY KIHSLRGVDA
SVIDLAVLAI PTRDEDNAEE PVLITKGTHR VAARFTGEHV ERSHRMTAGR LAVARMIGDD
ADARRAHLGL IELATSVCRP TDPACPRCPL NRACSEAAKR GSRIERQPVV SP
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