Gene Strop_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0545 
Symbol 
ID5056984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp616082 
End bp617215 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content68% 
IMG OID640472816 
Producthypothetical protein 
Protein accessionYP_001157406 
Protein GI145593109 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAACAG TCCATATCAC CCTGAGCGAA ACCAACCCCA CGGCCGAATA CGTCGCACTC 
CAGCGTTACT CAGGCGCGAT GCTGTTCGGC ACACGTCTCC GCGTATACCT GGACGGAGCC
GCCGAGGCGA CCGTGGATCT GGAGTCGACG GTCGGCCGGG CATGGCGCTG GCGGGCGCAG
GAGATCGGGT ACCACGACAT GGTTACCCGC ACCGTCGCGG TACCGGAGTC CGAGACTCCG
GTTGAATACG CCGACCTGGT CGACGTGGAC CCCGAGACCA TGCAGCCCGA CGACGAGCCT
GAGGCGGCCT GGTGGCAGGC GCTCTCGGAG ACCGCTGCCG GGGTTGTGCC GGATGGGTCG
GTCGGCCTCG TCAAACTTGC GCCCGATGTC CTGGCGGCGT TGGACGAGGT TGGGCAGCCC
GGCCCGCAGG GCGACCAGGG CTTGAGTGCC TATGAGGTCG CGGTGGCTGG CGGCTACTCG
GGTACCGAGG CTGACTGGCT CTTGGGGCTG GTGGGGCCAG CGGGACTGCC GGGCGCTACG
GGCGACCCCG GCCCGGGTGT CACGGCCGGC GGCACGGTGG GCCAGGTGCT AGCCAAGGGC
AGCGCGACCG ACCATGACAC TGAGTGGATC GATCCCGTAC CGAGCGCACA CGCATCGTCA
CACGCCCCAG GTGGGGCGGA TGATCTGTCC GCCACCTATT CGGCGGTCGA CACGGTGCAC
GACTCTGCCC CGCCAAGGGA CTACCTGAGG CGCATCCGAC TCGACTATCC GATCAGTGTG
GGCAACCCCG ATATTGAGCG GATCTATGTC GGGACTGGCG CCGGCGAGTT GTCGGCATGG
CGCAACGAGT GGGGCGGGCT AAGGGGCACG CCCCATGTGG CATACAAGGC CGATGCGCTG
GTACGCGGCA TCCCGAGAAC GGATCTTGGT GCGTCCGCTG ATGGCGGGTG GCTGGAGTTG
GAGGACGCTA GTCGCACCAC TCAGCTCTAC AAGCGGGACT GGTGGGGTCG GCTGTGGCGG
TCCGATGGGG CGGCTGCCGC GATTCAGATG GCCGATGTCC TGGTGCTTGG TCCAGGAGAC
CCTGTGCCGT CTGGCACTCC GGCGGGCACC GTCATCGTGA GGACCGAGGC GTGA
 
Protein sequence
MTTVHITLSE TNPTAEYVAL QRYSGAMLFG TRLRVYLDGA AEATVDLEST VGRAWRWRAQ 
EIGYHDMVTR TVAVPESETP VEYADLVDVD PETMQPDDEP EAAWWQALSE TAAGVVPDGS
VGLVKLAPDV LAALDEVGQP GPQGDQGLSA YEVAVAGGYS GTEADWLLGL VGPAGLPGAT
GDPGPGVTAG GTVGQVLAKG SATDHDTEWI DPVPSAHASS HAPGGADDLS ATYSAVDTVH
DSAPPRDYLR RIRLDYPISV GNPDIERIYV GTGAGELSAW RNEWGGLRGT PHVAYKADAL
VRGIPRTDLG ASADGGWLEL EDASRTTQLY KRDWWGRLWR SDGAAAAIQM ADVLVLGPGD
PVPSGTPAGT VIVRTEA