Gene Strop_0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0465 
Symbol 
ID5056904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp526954 
End bp527649 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content72% 
IMG OID640472738 
Producthypothetical protein 
Protein accessionYP_001157328 
Protein GI145593031 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.173305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAGTG TCGCTTTCCC CGACAGCCGG ATGGGGTTGC ACCGCACCGA CGCCGCTTCC 
GTTGGTGGCC TGCGCCTGGT CGCCGGCGGC GGTGGCCTTG TGGTCGGTCG CAACCGGCAG
CAGGAGCCGG TGGGGCTGCG TCTGTTCCGC GCCGAACCGA CCCGGCTGAT GCTGACCGGC
GGTGTCCGCA GTGCCCAGCT GATCGCCTTC CGCGCCATCG CGCTCGGCGC CCGGCTGTTC
ATCCAGACGG GCCGCGAGCG GGAGTGGGAC GCCTTCCTGC GGCGCTGCGT CATCGGCCGG
GAGATCGCCT CGTTCCTGCC ACCGGGTGTC TCGCCGCCGG CCGCGGCCAA CCCGACCGAA
CCGCAGCTCG TCGTGGTCGA CACCGGCCCG GTCACCGGAC CTGACCCGGG GCTCAGTATG
CCGTGGCGGG CCACCCTGGT GGTCCGCGAC GACCTGGCCG GTTGGGACTC CACCGCACTG
GTCCGCAGCG ACATCGTGCT GCTCCAGCGG CTGACGGCAG CGGAGGCAGC GACGGCGGCG
AGCGCGTTGG GGCTGGTGAG CGTGCAGAGC TGGTTCACCC AGCTGCACCC GGAGATGGTC
GGCCTGATCA CCAGGGGCAA GGTGCAGTGG GTCATGCTGA GTATGACCCA GACGGAGCGC
CAGTTGATCG GCTCGGTCGC TCGCGGCGGC GTCTGA
 
Protein sequence
MKSVAFPDSR MGLHRTDAAS VGGLRLVAGG GGLVVGRNRQ QEPVGLRLFR AEPTRLMLTG 
GVRSAQLIAF RAIALGARLF IQTGREREWD AFLRRCVIGR EIASFLPPGV SPPAAANPTE
PQLVVVDTGP VTGPDPGLSM PWRATLVVRD DLAGWDSTAL VRSDIVLLQR LTAAEAATAA
SALGLVSVQS WFTQLHPEMV GLITRGKVQW VMLSMTQTER QLIGSVARGG V