Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0465 |
Symbol | |
ID | 5056904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 526954 |
End bp | 527649 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640472738 |
Product | hypothetical protein |
Protein accession | YP_001157328 |
Protein GI | 145593031 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.173305 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAGAGTG TCGCTTTCCC CGACAGCCGG ATGGGGTTGC ACCGCACCGA CGCCGCTTCC GTTGGTGGCC TGCGCCTGGT CGCCGGCGGC GGTGGCCTTG TGGTCGGTCG CAACCGGCAG CAGGAGCCGG TGGGGCTGCG TCTGTTCCGC GCCGAACCGA CCCGGCTGAT GCTGACCGGC GGTGTCCGCA GTGCCCAGCT GATCGCCTTC CGCGCCATCG CGCTCGGCGC CCGGCTGTTC ATCCAGACGG GCCGCGAGCG GGAGTGGGAC GCCTTCCTGC GGCGCTGCGT CATCGGCCGG GAGATCGCCT CGTTCCTGCC ACCGGGTGTC TCGCCGCCGG CCGCGGCCAA CCCGACCGAA CCGCAGCTCG TCGTGGTCGA CACCGGCCCG GTCACCGGAC CTGACCCGGG GCTCAGTATG CCGTGGCGGG CCACCCTGGT GGTCCGCGAC GACCTGGCCG GTTGGGACTC CACCGCACTG GTCCGCAGCG ACATCGTGCT GCTCCAGCGG CTGACGGCAG CGGAGGCAGC GACGGCGGCG AGCGCGTTGG GGCTGGTGAG CGTGCAGAGC TGGTTCACCC AGCTGCACCC GGAGATGGTC GGCCTGATCA CCAGGGGCAA GGTGCAGTGG GTCATGCTGA GTATGACCCA GACGGAGCGC CAGTTGATCG GCTCGGTCGC TCGCGGCGGC GTCTGA
|
Protein sequence | MKSVAFPDSR MGLHRTDAAS VGGLRLVAGG GGLVVGRNRQ QEPVGLRLFR AEPTRLMLTG GVRSAQLIAF RAIALGARLF IQTGREREWD AFLRRCVIGR EIASFLPPGV SPPAAANPTE PQLVVVDTGP VTGPDPGLSM PWRATLVVRD DLAGWDSTAL VRSDIVLLQR LTAAEAATAA SALGLVSVQS WFTQLHPEMV GLITRGKVQW VMLSMTQTER QLIGSVARGG V
|
| |