| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0374 |
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| Symbol | |
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| ID | 5056812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 430869 |
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| End bp | 431711 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640472646 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001157237 |
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| Protein GI | 145592940 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCGTTT CAGGTAAACC TACGGCCGGT GGCTCCCCGG TACGGGCGCA CCCCGCTAAC
CTCCTGATCG ACGGCGGCTT CGAAGGGGGA CAGCGCATGG GCGAGCGGCT GGCCGTGGTT
AGTGGGGGCG GCACCGGGAT CGGGGCAGCC ACCGCACAGG TGCTCGCCGT TGACGGTTTC
GATGTGCTCG TCGTGGGCCG CCGGGAGGAC GCGCTGCGGG CCACCACGGC TCGGCTCTCC
TGGGACCTCG CCCGACCCGG CGCGGTCCGG GCGGTGGTGG CGGACCTGAC CGATCCGCAG
CAGGTTCCCC GGGTGGTCGA GGCGGTCGAC GGCCGGGCGG TGGACGCCGT CGTCAACAAC
GCCGGGGGCT ACCTCGGTGG GGAGCCTGAC ACCCTGGCCG GGGTCGCCGA GCAGTGGCGG
GCCAGTCTCG AGGCGAACCT CCTCACCGCC GTCCTGCTCA CCGAGGCGCT GCGACCAACC
CTGCGGCGCC CCGGCGGCCG GGTGATTCTG GTCAGCTCGG CCGCGGCGCA GCAGGGCGGA
GGTGGGCCAC ACTCCGCGGC GAAGGCCGCG CTGCACGGCT GGGCGTACGA CTTGGCGGTG
CGGCTCGGTC CGGACCAGGT CACGGTCAAT GTGGTCAGCC CCGGGTACGT CGTGGACACC
GAGTTCTTCG GTGGCCGGAG GACCCCCGAG GGGCACGCCC GGCGGGTCGC GGCCACGCTG
GTCGGGCGGG CCGGCACCCC GGACGACATC GCCGCCGCAG TCCGCTACCT CGCCGGCCCC
GCCGCCGGTT ACGTCACCGG GCAGGTCCTC GGCGTCGACG GCGGGTCGGT CCTGGGCCGG
TGA
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| Protein sequence | MGVSGKPTAG GSPVRAHPAN LLIDGGFEGG QRMGERLAVV SGGGTGIGAA TAQVLAVDGF
DVLVVGRRED ALRATTARLS WDLARPGAVR AVVADLTDPQ QVPRVVEAVD GRAVDAVVNN
AGGYLGGEPD TLAGVAEQWR ASLEANLLTA VLLTEALRPT LRRPGGRVIL VSSAAAQQGG
GGPHSAAKAA LHGWAYDLAV RLGPDQVTVN VVSPGYVVDT EFFGGRRTPE GHARRVAATL
VGRAGTPDDI AAAVRYLAGP AAGYVTGQVL GVDGGSVLGR
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