Gene Strop_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0352 
Symbol 
ID5056790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp403218 
End bp403865 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content68% 
IMG OID640472624 
Producthydrolase 
Protein accessionYP_001157215 
Protein GI145592918 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCTG CGCACCCGCA CCTGGTCTGG GACTGGAATG GAACCCTGCT CAACGACCTG 
GACCTGGTCG TGGCGTCAAC CAATGTCGCC TTCGCCAGCG TTGGTGGGCC GGCGGTGACC
GCCGACGAGC ATCGGGTTCG GTTCCGTCGA CCGATCGCCG ACTACTACGC GGAGGTGCTC
GGGCAGGCGG TGGACGAGAC GGCGTTCGGT CAGCTGGACA AGCTCTTCCA CGAGGTGTAC
AAGGACGGGC TGACCACCTG CGCGCTGGCA CACGACGCGG TTGACGCGAT GTCGTCCTGG
CCCGGGAGCC AGTCGCTGCT CTCCATGTGG TTCCACGAGG ATCTGGTGCC GACCGTGCAG
ACCTACGGAC TGACCAAGAA CTTCCTACGG GTGGACGGGC TCCGGGCTGA GATCGGTGGT
GATCGGAAGG CCGAGTCCCT GGCCCGGCAC CTGGCCGAAC TGAGGCTGGA TGGCCGGGAC
GTGGTGCTGA TCGGCGACTC GCTCGACGAC GCAGACGCGG CCCGGTCGGT CGGTGGCCGT
GCGGTCCTCT ACGCCGGGGG CTTCACCGAC GCCGCCCGCC TGCGTGCCTC CGGTCATCCG
GTCGCGGAGA CCCTCACCGA GGCGGTCGCC CTGGCCCACC CACATTGA
 
Protein sequence
MSSAHPHLVW DWNGTLLNDL DLVVASTNVA FASVGGPAVT ADEHRVRFRR PIADYYAEVL 
GQAVDETAFG QLDKLFHEVY KDGLTTCALA HDAVDAMSSW PGSQSLLSMW FHEDLVPTVQ
TYGLTKNFLR VDGLRAEIGG DRKAESLARH LAELRLDGRD VVLIGDSLDD ADAARSVGGR
AVLYAGGFTD AARLRASGHP VAETLTEAVA LAHPH