Gene Strop_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0349 
Symbol 
ID5056787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp400074 
End bp400958 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content72% 
IMG OID640472621 
Producthypothetical protein 
Protein accessionYP_001157212 
Protein GI145592915 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAGCG ACCTCTTCTT CTCCCGTCGG CGCGCCGAGC GCTTCGCGCA ACTTCTCGAC 
GAAGCGAACG GCGGCCGACG ACACCACGTC CGATCCCGGG TCGACGAAAA GCTCACGGAA
CTCGTCGCAG TCGGGCAGCA GCTCGGTGAC GCCACCCCGA CGGTCGAGGT CAGTACCGAG
TTCCGGACCG GCCTACGGGC GATGCTGCTG GCCACCGCCG AACGCGAGGG CCTCGGCCGG
CCCACCCCGG CGGCCACCAC CGACCGGACG GAACACCGAC CGGCATCGAG CCGCTCCTTC
CTCCTCCCCG CCGTCACCGC GCGGCGGGCC CGGGCCCGCG GGGCGATCCT GATCGGCATC
GCGACCGGTG CCGTCGCCGT CTCCGGCATC TCCGCAGCCA GTGAGAACGC GGTACCGGGC
GACGCCCTGT ACGGGATGAA GCGTTCGACC GAACGCGCGC AGCTCGTGTT GACCGGCTCG
GATCACAGTC GTGGGCAGCT CTTCCTGGAC TTCGCGCGGA CCCGCCTGAG CGAGGCCGCC
CAGCTACGCG GCGACCGGAT CGGCTACAGC GGAGTCCTGG ACGACATGGA CGCCGACACC
CGCCACGGCG TACGCCTGCT CACCACCGCC GCGGTGCAGG GCTCCGACCT GACGGCGCTC
GACGTGGTCA ACACCTTCGT CGCCGCGCAA CGTACCGCGG TCAGTGGGCT CCTGGACAGC
GGGAACCGTG CCGACCGCGA CCGCACCCAA CGTTCCCTCA CGCTCCTCGA CGATGCCCAT
CTGCGCTCGG ACGCGCTGCG CGCCGCCATC GTCTGTGGCC TGCCCGCGCC GAGCGGCAGC
GACGCACTCG GTCCCACTCC GACGAGCTGC CCCACCAACC GCTGA
 
Protein sequence
MNSDLFFSRR RAERFAQLLD EANGGRRHHV RSRVDEKLTE LVAVGQQLGD ATPTVEVSTE 
FRTGLRAMLL ATAEREGLGR PTPAATTDRT EHRPASSRSF LLPAVTARRA RARGAILIGI
ATGAVAVSGI SAASENAVPG DALYGMKRST ERAQLVLTGS DHSRGQLFLD FARTRLSEAA
QLRGDRIGYS GVLDDMDADT RHGVRLLTTA AVQGSDLTAL DVVNTFVAAQ RTAVSGLLDS
GNRADRDRTQ RSLTLLDDAH LRSDALRAAI VCGLPAPSGS DALGPTPTSC PTNR