Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0302 |
Symbol | |
ID | 5056740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 342419 |
End bp | 344425 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640472574 |
Product | hypothetical protein |
Protein accession | YP_001157165 |
Protein GI | 145592868 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.75986 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCGTC CCACACATGT TCGCAGGCGG GGAACAGTCC CCAGGCGCAG CGCACTCCGT TTAGGACTTG CGATTGCACT GATCGGCAGC GGCATCACCG TCACCGCTGG AGCTCACCCC GCACAGGCGT CCGAAGATGC GTTCAGCTGC ACCGGCGCGG CACAGTTTTT CAACTCCACC AGCAGCGGCA CACTGACTCA CCGAAAATAC GAAACCCCGG GATACGACGA CGGCAGCAGC GGAGAGTGGA CCGCCGCCAC CACCATCGGA GTCGGCTGGC AACAGTTCGG ACGCGTCCTC GGGGGCCCCG ACGGACGGGT CTACGGGATC AAATCGGAGG GAATGTTCCG CTACCGGTGG ACCGGATTCG GGTGGGAAAG GATCGACGGC GCACAAGGAC CGCAGATCAG CTCCAGCTTC GGGTCGTACG CCGAATCAGC AAATCGCAAC AAGATCACCA TTGACGAGTC GGGTGACTTC TACACCATCG ACGACACCGG AAGGCTTCGC TGGCACCGCT ACAGCGAATC GTCAAAGACA TGGACCATCG ACGGCCGAGT GATCGACACG GGATGGGACC GGTACAACCT CCTGTTCGCC ACCTCCCCGG GAGTCCTCTA CGCCCGCGCC GCCGACGATC GTCTCTACCG GTATCGCTTC GACCCGACGA CGCAGCGATG GATCAGCTAC AACCTCCACG TCGGTTCCGG CTGGGGCTAC TACACCAGTA TCTTCTCCGC CGGCGGTGAC ACCGTCTACG GCGTCCTGGA CAACGGCGAC CTCTACCAGT ACCGCTACCG AGAAGACCTG CTCGACTGGG AGCTCGTCTT CCACAAGGCC GGCTGGGGAT GGCGTTTCCC CGAGATCTTC GCGACCACGA ACACCTGCCA CCAGGGCGCG ATCAGCAGCC CCGCGCTTCC TTCGATACCG TTGCAGCCGA ACATGCCGAT CGCGGCGATG CAGGCCCCAG CAGCCTCAAC AGCCCTCGGC ACCCTGGAAA TCGCCTACAA CGACAACATC GGCCAAATCC GACACGGCCG GGCTAACCCC GACGCCCTCG CCACAATCCA ATGGTCAGCC CCCGCCAACA TCGTGCACGT GGGCACCCCG GCCCTCGTCG CGGACGCCGA AGACAACGTA AACGTCTTCA GCCAAACCAG CACCAGCGAC ATCCAACGAC TCACCCAGAA AGCCCCCGCC TCCCCCGACT GGAAACCCTG GCTGGAACTC GGCGGCGCAA TGAAATCCGC CCCCGCCGCG ATCCAACTCT CCGACGATAG CCTCGCCGTC TTCGCCTACG ACACCAATGG CACCCTCTGG TCACGCCAAC AAGACGGAAC CACCGGCGAA CTCCTACCCT GGACCTCCAC CGGCGCCACC GGCCTAACTG GCACCCCAAT CGCCCAAATC GGCCCTGACC GCACCGCCAC CATCCTCGCC ACCACCAGCA CCGGCAAAGT CCAAACCGCC ACCTGGCAAG CCGGAACTCT CACCACCGAA TGGACCGACC TCGGCGACAC CCAATTCACC GGCTCACTAA CCACCACCCT CCTACCCGGG TACCGAGTAA TGGCCGTCGG TCACGCCACC AACGGCACCA TCCAAACCCA ACTACAAAAC ATCAACGGCA CCTGGCCCGG CACCTGGACC ACAATCGGCG ACAACTCAAT CACCCCGGAC GGATCACCCA GCACCATCCT CAGCCCCACC ACCGGCCGCG CCTGGGTCTT CATCCGCGCC ACCGACGGCA ATATCTACCG CACCCGCCAC ACCGCCGCAG GATCAACCAC CTGGACAACC TGGGGACCCG TCACCTCCGG AGAAACCTAC CCCGTCGATC CCACCGCATT CACCTGGCAA AACTCAAACG GCCACCAAAT CGCCTTCGTA ACCCGCAACA CCAACGGCTC CATCCGCCTC TACGCCGCAG ACGAGACCAC TACCACCACC AAGACCACCA CAGAACCCAC ATTCACCCAA CACAACATCC CAACACCACA CCAGTAA
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Protein sequence | MFRPTHVRRR GTVPRRSALR LGLAIALIGS GITVTAGAHP AQASEDAFSC TGAAQFFNST SSGTLTHRKY ETPGYDDGSS GEWTAATTIG VGWQQFGRVL GGPDGRVYGI KSEGMFRYRW TGFGWERIDG AQGPQISSSF GSYAESANRN KITIDESGDF YTIDDTGRLR WHRYSESSKT WTIDGRVIDT GWDRYNLLFA TSPGVLYARA ADDRLYRYRF DPTTQRWISY NLHVGSGWGY YTSIFSAGGD TVYGVLDNGD LYQYRYREDL LDWELVFHKA GWGWRFPEIF ATTNTCHQGA ISSPALPSIP LQPNMPIAAM QAPAASTALG TLEIAYNDNI GQIRHGRANP DALATIQWSA PANIVHVGTP ALVADAEDNV NVFSQTSTSD IQRLTQKAPA SPDWKPWLEL GGAMKSAPAA IQLSDDSLAV FAYDTNGTLW SRQQDGTTGE LLPWTSTGAT GLTGTPIAQI GPDRTATILA TTSTGKVQTA TWQAGTLTTE WTDLGDTQFT GSLTTTLLPG YRVMAVGHAT NGTIQTQLQN INGTWPGTWT TIGDNSITPD GSPSTILSPT TGRAWVFIRA TDGNIYRTRH TAAGSTTWTT WGPVTSGETY PVDPTAFTWQ NSNGHQIAFV TRNTNGSIRL YAADETTTTT KTTTEPTFTQ HNIPTPHQ
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