Gene Strop_0302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0302 
Symbol 
ID5056740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp342419 
End bp344425 
Gene Length2007 bp 
Protein Length668 aa 
Translation table11 
GC content63% 
IMG OID640472574 
Producthypothetical protein 
Protein accessionYP_001157165 
Protein GI145592868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.75986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGTC CCACACATGT TCGCAGGCGG GGAACAGTCC CCAGGCGCAG CGCACTCCGT 
TTAGGACTTG CGATTGCACT GATCGGCAGC GGCATCACCG TCACCGCTGG AGCTCACCCC
GCACAGGCGT CCGAAGATGC GTTCAGCTGC ACCGGCGCGG CACAGTTTTT CAACTCCACC
AGCAGCGGCA CACTGACTCA CCGAAAATAC GAAACCCCGG GATACGACGA CGGCAGCAGC
GGAGAGTGGA CCGCCGCCAC CACCATCGGA GTCGGCTGGC AACAGTTCGG ACGCGTCCTC
GGGGGCCCCG ACGGACGGGT CTACGGGATC AAATCGGAGG GAATGTTCCG CTACCGGTGG
ACCGGATTCG GGTGGGAAAG GATCGACGGC GCACAAGGAC CGCAGATCAG CTCCAGCTTC
GGGTCGTACG CCGAATCAGC AAATCGCAAC AAGATCACCA TTGACGAGTC GGGTGACTTC
TACACCATCG ACGACACCGG AAGGCTTCGC TGGCACCGCT ACAGCGAATC GTCAAAGACA
TGGACCATCG ACGGCCGAGT GATCGACACG GGATGGGACC GGTACAACCT CCTGTTCGCC
ACCTCCCCGG GAGTCCTCTA CGCCCGCGCC GCCGACGATC GTCTCTACCG GTATCGCTTC
GACCCGACGA CGCAGCGATG GATCAGCTAC AACCTCCACG TCGGTTCCGG CTGGGGCTAC
TACACCAGTA TCTTCTCCGC CGGCGGTGAC ACCGTCTACG GCGTCCTGGA CAACGGCGAC
CTCTACCAGT ACCGCTACCG AGAAGACCTG CTCGACTGGG AGCTCGTCTT CCACAAGGCC
GGCTGGGGAT GGCGTTTCCC CGAGATCTTC GCGACCACGA ACACCTGCCA CCAGGGCGCG
ATCAGCAGCC CCGCGCTTCC TTCGATACCG TTGCAGCCGA ACATGCCGAT CGCGGCGATG
CAGGCCCCAG CAGCCTCAAC AGCCCTCGGC ACCCTGGAAA TCGCCTACAA CGACAACATC
GGCCAAATCC GACACGGCCG GGCTAACCCC GACGCCCTCG CCACAATCCA ATGGTCAGCC
CCCGCCAACA TCGTGCACGT GGGCACCCCG GCCCTCGTCG CGGACGCCGA AGACAACGTA
AACGTCTTCA GCCAAACCAG CACCAGCGAC ATCCAACGAC TCACCCAGAA AGCCCCCGCC
TCCCCCGACT GGAAACCCTG GCTGGAACTC GGCGGCGCAA TGAAATCCGC CCCCGCCGCG
ATCCAACTCT CCGACGATAG CCTCGCCGTC TTCGCCTACG ACACCAATGG CACCCTCTGG
TCACGCCAAC AAGACGGAAC CACCGGCGAA CTCCTACCCT GGACCTCCAC CGGCGCCACC
GGCCTAACTG GCACCCCAAT CGCCCAAATC GGCCCTGACC GCACCGCCAC CATCCTCGCC
ACCACCAGCA CCGGCAAAGT CCAAACCGCC ACCTGGCAAG CCGGAACTCT CACCACCGAA
TGGACCGACC TCGGCGACAC CCAATTCACC GGCTCACTAA CCACCACCCT CCTACCCGGG
TACCGAGTAA TGGCCGTCGG TCACGCCACC AACGGCACCA TCCAAACCCA ACTACAAAAC
ATCAACGGCA CCTGGCCCGG CACCTGGACC ACAATCGGCG ACAACTCAAT CACCCCGGAC
GGATCACCCA GCACCATCCT CAGCCCCACC ACCGGCCGCG CCTGGGTCTT CATCCGCGCC
ACCGACGGCA ATATCTACCG CACCCGCCAC ACCGCCGCAG GATCAACCAC CTGGACAACC
TGGGGACCCG TCACCTCCGG AGAAACCTAC CCCGTCGATC CCACCGCATT CACCTGGCAA
AACTCAAACG GCCACCAAAT CGCCTTCGTA ACCCGCAACA CCAACGGCTC CATCCGCCTC
TACGCCGCAG ACGAGACCAC TACCACCACC AAGACCACCA CAGAACCCAC ATTCACCCAA
CACAACATCC CAACACCACA CCAGTAA
 
Protein sequence
MFRPTHVRRR GTVPRRSALR LGLAIALIGS GITVTAGAHP AQASEDAFSC TGAAQFFNST 
SSGTLTHRKY ETPGYDDGSS GEWTAATTIG VGWQQFGRVL GGPDGRVYGI KSEGMFRYRW
TGFGWERIDG AQGPQISSSF GSYAESANRN KITIDESGDF YTIDDTGRLR WHRYSESSKT
WTIDGRVIDT GWDRYNLLFA TSPGVLYARA ADDRLYRYRF DPTTQRWISY NLHVGSGWGY
YTSIFSAGGD TVYGVLDNGD LYQYRYREDL LDWELVFHKA GWGWRFPEIF ATTNTCHQGA
ISSPALPSIP LQPNMPIAAM QAPAASTALG TLEIAYNDNI GQIRHGRANP DALATIQWSA
PANIVHVGTP ALVADAEDNV NVFSQTSTSD IQRLTQKAPA SPDWKPWLEL GGAMKSAPAA
IQLSDDSLAV FAYDTNGTLW SRQQDGTTGE LLPWTSTGAT GLTGTPIAQI GPDRTATILA
TTSTGKVQTA TWQAGTLTTE WTDLGDTQFT GSLTTTLLPG YRVMAVGHAT NGTIQTQLQN
INGTWPGTWT TIGDNSITPD GSPSTILSPT TGRAWVFIRA TDGNIYRTRH TAAGSTTWTT
WGPVTSGETY PVDPTAFTWQ NSNGHQIAFV TRNTNGSIRL YAADETTTTT KTTTEPTFTQ
HNIPTPHQ