Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0249 |
Symbol | |
ID | 5056687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 283896 |
End bp | 284906 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640472521 |
Product | ABC transporter related |
Protein accession | YP_001157112 |
Protein GI | 145592815 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.134509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGGCTG TCCTGGAAAT CGAAGGTCTC CAAAAGACCT ACCGCAGCCG AAGCCGAAGG CGGGGCACCC GCAACGCGCT CGACGGCTTC GACATGTGGG TGGAGGCGGG CCAGGTGCAC GGCTTCCTCG GCCCGAACGG GTCGGGCAAG ACGACCACCC TCCGTACGCT GCTCGGCCTC ATCCGGCCCG ACGGCGGCCG GATGAGACTG CTCGGGCACG AGGTGCCGGC CGACCTGTCC ACGGTCGCCG GTCAGGTCGG TGCAGTCGTC GAGAGCCCGC AGTTCTTCCC ACACTTCACT GCTCGGGACA TGCTCTCCCT GCTGGCAACC GCGGGCGAGG TCCGCTCCCA CCGGGTCGAC GAGGTGCTGG AGCTGGTGGG GCTGCGAGAC CGGTCCCGGG AGCGGGTGAA GACCTACTCG CTCGGCATGA AGCAACGGTT GGCTGTCGCC TCCGCCCTGC TGAAGGAGCC GCGACTGTTG ATCCTGGATG AGCCCGCCAA CGGACTGGAC CCGGGTGGCA TCCGGGAGAT GCGGTCGTTG GTGCGGAACC TGGCCGAATC CGGCACCACG GTGCTGCTCT CCAGCCACAT CCTCGCCGAG ATCCAACTGA TCTGTGACTC GGTCACGATC ATCTCGTTGG GCCGCCGGGT CGCGTTCGGC CCGGTGGAGA AGGTGCTGGC GGCCCACTCG GCCAGCGCTG TCCGGGTACG CCTGGAGAGG GTGGCCGACC TGCCGGAGGC GAGCGAGGCG CTGACCCGGG CCGGGTTCCG CGTGACCCGG GAACCGGACC ACCTGATGCT CACCGGGGTG GAGGAAGCCG CCATGGTGAC CCGCCTCCTC GCCGGTCATG GCCTGTACGT CAGTGAGCTG GTCTGGGTCG ACGCCGATCT GGAGAGTGTC TTCCTCGAGC TGACCGCCAC CGTGCCGGCC CCCGGCCAAA GCCGGCAGGT CGACCAGTCC GTCAGGCCCG CGGCGGTGGG TCCCAGCAGC ACAGGAGGGT GGGGCGCGTG A
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Protein sequence | MTAVLEIEGL QKTYRSRSRR RGTRNALDGF DMWVEAGQVH GFLGPNGSGK TTTLRTLLGL IRPDGGRMRL LGHEVPADLS TVAGQVGAVV ESPQFFPHFT ARDMLSLLAT AGEVRSHRVD EVLELVGLRD RSRERVKTYS LGMKQRLAVA SALLKEPRLL ILDEPANGLD PGGIREMRSL VRNLAESGTT VLLSSHILAE IQLICDSVTI ISLGRRVAFG PVEKVLAAHS ASAVRVRLER VADLPEASEA LTRAGFRVTR EPDHLMLTGV EEAAMVTRLL AGHGLYVSEL VWVDADLESV FLELTATVPA PGQSRQVDQS VRPAAVGPSS TGGWGA
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