Gene Strop_0233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0233 
Symbol 
ID5056671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp267186 
End bp268373 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content69% 
IMG OID640472505 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001157096 
Protein GI145592799 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.311906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACC GCATCGTCGT CCTCGGAGCC GGATACGCAG GAGCTACCGC CGCCGGACGT 
CTTGCCCGGC GGCTGCACCC CGACGGTACC GAGATCACTG TCGTCAACGC CGACGCCGAG
TTCGTCGAGC GGGTCCGGAT GCACCAACTC GCGACCGGAC AGCGCCTCAG CCCCCGCCAG
CTGCGCGACA TCTACGCGGG TACGGGCGTG CGGCTGCGAC TGGCACGGGT CACCGCCGTC
GACGTTGATC AGAAGATCGT CACGCTCGTC GACGAGCACG GTGTCGACGA GATCGCCTAC
GACACCCTCG TCTACGCCCT CGGTAGCACC GCCGCCGACC ACGGTGTTCC CGGCGTCGCC
GAGCACGCCC ACGATGTGGC CGGCAAGCAG TCCGCGCTGC GGCTGCGCGA CCGCCTGGCC
GGCCTCGTTG CTGGCGAGAA CATCCTGGTC GTTGGCGGAG GCCTCACCGG CCTCGAGGTC
GCTACCGAGA TCGCCGAGGC GCGGTCGGAC CTCACCGTCG CGCTCGCCAC CCGGGGCGGC
CTCGGTGACT GGCTTGATGC CGGGGCGCGG CGTCATCTGC GACGGGTCGT CGACCGGCTT
GGCATCGCCG TCCACGAGCA CACAGACATC TCCCGGGTCG AGGCGACCAG TGCGATCACC
GGCGACGGCC GGACCGTCCC GGCGCAGGTG ACGGTCTGGA CGACCGGCTT GGCCGTTCAT
CCCATCGCCG CCGCCACGAC CCTGGAGCTC GCCGAAACAG GGCAGGTGAT CGTGGACGCC
ACCATGCGAA CGATCTCGCA CCCCGACGTG TACGCGGTCG GTGACGCCGC GATCGCCGAT
GGGCCCGGTG GCAAGCCGCT ACGGATGTCC TGCGCCTCAG GAATCCCGAT GGGTTGGCAG
GCCGCCGACG CCATCGCCGC GCGCCTCACC GATCGGGAGG TCCCGAAGGT CTCGCTCCGC
TACTTCAACC AGTGCATCAG TCTTGGCCGG CGGGACGGGC TCATCCAGTT CGTCACCGCC
GACGACCAGG CCAAGACGTC CTTCATCACC GGAAAGGTGG CGGCTCGCTA CAAGGAAGCG
GTCTGCAAGG GCGCGGCCTG GAGCATCGTC CACCCGACGA TGTTGCTGCC GACTCGTCGT
CGCCACACCA CCACGATCCA AAAGGAGCGG CGCGCCGCCA CCGCATGA
 
Protein sequence
MKHRIVVLGA GYAGATAAGR LARRLHPDGT EITVVNADAE FVERVRMHQL ATGQRLSPRQ 
LRDIYAGTGV RLRLARVTAV DVDQKIVTLV DEHGVDEIAY DTLVYALGST AADHGVPGVA
EHAHDVAGKQ SALRLRDRLA GLVAGENILV VGGGLTGLEV ATEIAEARSD LTVALATRGG
LGDWLDAGAR RHLRRVVDRL GIAVHEHTDI SRVEATSAIT GDGRTVPAQV TVWTTGLAVH
PIAAATTLEL AETGQVIVDA TMRTISHPDV YAVGDAAIAD GPGGKPLRMS CASGIPMGWQ
AADAIAARLT DREVPKVSLR YFNQCISLGR RDGLIQFVTA DDQAKTSFIT GKVAARYKEA
VCKGAAWSIV HPTMLLPTRR RHTTTIQKER RAATA