Gene Strop_0199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0199 
Symbol 
ID5056635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp230664 
End bp231404 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content73% 
IMG OID640472469 
Productpeptidase M23B 
Protein accessionYP_001157062 
Protein GI145592765 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCGC CGTTGACCGG ACGCCGCCCG GGATATCCCC TGCTGCTCCT GCTCGCCGCG 
ATGCTCGCCG CGAGCTGCGC GACGACCCGC CCCGGGGTGG ACACGGGCAC GGCCAGCCGC
CCGGCCGCCA CGGACCCGGC CACCGCCCCG TCGGCCAGCT CGACTCCCAC AGCAGCAACG
GCTCCGCCGA GCGCGTCGGG GACGTCACCG GGGACACCGC CCGCCGAGGT CCGACACGTC
TTCCCGGTAC GGGCCAGCAA TGCCGCCTAC CATCCGACCC ACTCGATCTA CCCCGCCACG
GACATCTTCG CTGACTGCGG TGTTCCGGTG GTGGCGGTGA CTGACGGCTC GGTGCTGGAG
GTAAGCCGGG TGGACCGCTT CGACCGGGGT GGCCCCCTCG GCCCGTTCAA CGGCGGTTTG
TCGGTGGCGG TGCTGGGCGA TGACGGGGTG CGCTACTACG GCTCGCACCT GACCGAGGTC
GCGGCGGGCC TTGATCCGGG GGTACGTGTG GCCGCCGGGC AGCAACTCGG CACGGTCGGC
CGGACCGGCA ATGCGAACAA CGTCTGCCAT CTGCACTTCG GCATCTCACC GCCGTGCCCG
GGCAAGGACG GTTGGTGGAT CCGGCGGGGG GTGGTGTGGC CGGCGCCCTA CCTGGACGCC
TGGCGACGGG GGATCAACCG GTCGCCCGCC GTGGAGGTGG CGGACTGGCA ACGCCGACAC
GGCTGCCCGA AGGAGTCGTG A
 
Protein sequence
MPAPLTGRRP GYPLLLLLAA MLAASCATTR PGVDTGTASR PAATDPATAP SASSTPTAAT 
APPSASGTSP GTPPAEVRHV FPVRASNAAY HPTHSIYPAT DIFADCGVPV VAVTDGSVLE
VSRVDRFDRG GPLGPFNGGL SVAVLGDDGV RYYGSHLTEV AAGLDPGVRV AAGQQLGTVG
RTGNANNVCH LHFGISPPCP GKDGWWIRRG VVWPAPYLDA WRRGINRSPA VEVADWQRRH
GCPKES