Gene Strop_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0183 
Symbol 
ID5056616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp201264 
End bp201935 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content66% 
IMG OID640472450 
Productmethyltransferase type 11 
Protein accessionYP_001157046 
Protein GI145592749 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0293588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGAC ACCACAACTT CCACTCCGAG AATCGGGGCT ATCTGCCCGC CATGGGTAAG 
CAGTGGCTAC TGCCCCTCTA CGATCCTTTT GCCCGGTATA TTGGCATCAG ACGGGTTCAT
GAGAAGCTTC TGGATCGTGC GAATATCCGG CCGGGACAAC GGATCCTGGA AATTGGCTGC
GGCACCGGCG ACCTTCTGCG GACGCTCAAG CAACGGCATT CCGATGTCGA GGTGCTGGGC
ATCGACCCGG ACCTGAGCGC CCTACGCCGC GCCCGTCGCA AGGCGGCCCG GAGCAAGCTC
CAGATCCAGT ACGAGCGTGC GTTCGCCGAC GATCTGCCGT TGTCGGACGA CAGTGTTGAT
CGGGTGCTCT CCTCGTTCAT GCTGCATCAC CTCGCCGTCG CCGAGTGGGC GCCGGTGTTC
CGTGAGGTCC GGCGGGTGCT GCGTCCCGGT GGTGAGCTGC ACCTGGCCGA CATTGACGGG
TCCCATCCCG GACAGGATGG GGGTCATCCG CACCGCTTCG GCCAGACCGA GGAGAGCCTT
CCCGAGCTGG TGTTGGCGGC GCTCGCTGAC GCCGGTCTGA GCGGGGCACG GGAAAACGGC
TACGGGCGGG CCCGGCTGGG TCGGTACGTC TTCTACCGAG CGGACGCCGA ATGCGGCGGG
CGGTCGGACT GA
 
Protein sequence
MTGHHNFHSE NRGYLPAMGK QWLLPLYDPF ARYIGIRRVH EKLLDRANIR PGQRILEIGC 
GTGDLLRTLK QRHSDVEVLG IDPDLSALRR ARRKAARSKL QIQYERAFAD DLPLSDDSVD
RVLSSFMLHH LAVAEWAPVF REVRRVLRPG GELHLADIDG SHPGQDGGHP HRFGQTEESL
PELVLAALAD AGLSGARENG YGRARLGRYV FYRADAECGG RSD