Gene Strop_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0164 
Symbol 
ID5056597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp177412 
End bp178176 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content72% 
IMG OID640472431 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001157027 
Protein GI145592730 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.209107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGAAC GGGGTGAAGG CGTGACCGGC CTGCGGATCG ACGAACAGGC CGACCGGGTG 
GTGGCGATGC TGGACCGCCC GGAGAAGCGC AACGCCATCG ACGTCGACCT CGTCCAGGCG
CTCCACGAAC TCTGCGCCGA ACTGGAGGCC CGGCCACGGC TGCTGCTGCT CACCGGAGGG
GCCGAAGGCA TCTTCGCCGG GGGCGCCGAC ATCGGGCAGC TCCGCGAGCG CGACCGGTTG
GATGCCCTCG CCGCGATCAA CTCGGCCGTC TTCACCCGGA TCAGGGCGCT GCCGATGCCG
ACCGTGGTCG CGGTTGATGG GCCGGCCCTG GGCGGTGGTG CCGAGCTGGC GTACGCCTGC
GACCTACGGG TGTGCACCTC GCGTGCCTTC TTCGGGCAGC CCGAGGTGCG GCTTGGCATT
CTGGCCGGGG CGGGGGCGAC GCACCGGCTA CCGGCGCTGG TCGGGGAGGC ACGGGCGAAG
GAGCTGCTCT TCACCGGCCG GCGGGTGGAC GCTGCGGAGG CCCTGCGGAT CGGTCTGGTC
AACCAGGTGG TCACCGAGCC GGCCGAGCTG CTGCCGGCGG CCCACGCCCT GCTCGACGAG
GTGGCGAAGG GCTCCGCGCT CGCGTTGCGG CTGACCAAGC TGGCCGTGGA CGCTCCGGCC
GCCGCGCACC CCCACCTGGA TCTGGTCAGT CAGGCGGTGC TCTTCGAGGA TGAGGAGAAG
CACCGACGGA TGACCGATTT TCTCGAGCGT CGGAGCCGGT CCTGA
 
Protein sequence
MGERGEGVTG LRIDEQADRV VAMLDRPEKR NAIDVDLVQA LHELCAELEA RPRLLLLTGG 
AEGIFAGGAD IGQLRERDRL DALAAINSAV FTRIRALPMP TVVAVDGPAL GGGAELAYAC
DLRVCTSRAF FGQPEVRLGI LAGAGATHRL PALVGEARAK ELLFTGRRVD AAEALRIGLV
NQVVTEPAEL LPAAHALLDE VAKGSALALR LTKLAVDAPA AAHPHLDLVS QAVLFEDEEK
HRRMTDFLER RSRS