Gene Strop_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0162 
Symbol 
ID5056595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp175963 
End bp176445 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content71% 
IMG OID640472429 
Producthypothetical protein 
Protein accessionYP_001157025 
Protein GI145592728 
COG category 
COG ID 
TIGRFAM ID[TIGR03666] PPOX class probable F420-dependent enzyme, Rv2061 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.042536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCG CCGGGGCCGT TCCACGACCA GGTCTGAGGT ACACGGCACG CCGTCGGGCT 
CACTGCCCGG TCAGCCGGCC GCGGAGTCGT ATCCTTGGCG GCGTGACCAC GCTGGACCGA
CTCGCGACCG AGAAATACAT CCTGCTCACG ACCTTTCGCA AGGACGGCCG TGCGGTGCCG
ACCCCGGTCT GGGCGGTCCG TGACGGCGAT GCGCTCGCAG TCTGGACCGT TACCGGCTCC
GGCAAGGTGA AGCGGATCCG GCGCAGCGGC GATGTGACCG TCGCCCCCTG CGATGTCCGA
GGACGACCGC ACGGTCCGGC GGTACCCGGT CACGCCGCGC TCGCCGACTC GGCGGGCACC
CGGCGGGTCC GCGGCCTGAT CAAGGAGAAG TACCGGGTAC TCGGCCGGCT CACCCTGCTG
GGGAGCCGGC TACGCCGGGG CGAGCAGGGC ACGGTGGGGA TCCGGGTCAC GCTCAAGGGT
TGA
 
Protein sequence
MDTAGAVPRP GLRYTARRRA HCPVSRPRSR ILGGVTTLDR LATEKYILLT TFRKDGRAVP 
TPVWAVRDGD ALAVWTVTGS GKVKRIRRSG DVTVAPCDVR GRPHGPAVPG HAALADSAGT
RRVRGLIKEK YRVLGRLTLL GSRLRRGEQG TVGIRVTLKG