| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0155 |
|---|
| Symbol | |
|---|
| ID | 5056588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 169887 |
|---|
| End bp | 171041 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640472422 |
|---|
| Product | phosphoribosylformylglycinamidine cyclo-ligase |
|---|
| Protein accession | YP_001157018 |
|---|
| Protein GI | 145592721 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
|---|
| TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCACG TGTCCGAGCG CAGCGGCGCA GGAAGTAGCC AGACCGGTGC CGGCGGTGAC
CGCCAGCCCT GGACCACCGC CACCGGGCGC CCGGTGCGCA AACGCTCGGC CTCGTACCTG
GATGCCGGTG TCTCGATCGA GGCGGGCGAC CGCGCGGTTG AGCTGCTCAA GTCGAAGGTG
AAGCAGACTC GACGGCCAGA GGTGATGGGC GACCTGGGTG GCTTCGCCGG CCTGTTCCGG
CTGGACACGA AGAAGTACAA GAGCCCGATC CTGGCCTCCT CCACCGACGG TGTCGGCACG
AAGCTGGTGA TCGCGCAGCA GCTCGACATT CACGACACGG TCGGCATCGA CCTGGTCGCC
ATGGTCGTGG ACGATCTGGT GGCGTGCGGT GCCGAGCCGC TGTTCCTGCT CGACTACATC
GCCACCGGGG AGGTTGTCCC GGACCGGGTT GCCGAGATCG GCGCTGGCAT CGCCGATGGC
TGCCGTTACG CCGGTTGTGC CCTGCTGGGT GGGGAGACCG CCGAACACCC CGGTGTCCTC
CGCCCGGATG AGTACGACAT CTCAGCCACC GGGGTGGGCG TGGTGGAGGA GAGCGGAATC
CTCAGCTCCG AGCGGGTGGA GGTCGGCGAC GTGGTGATCG CGATGCGCGC GTCCGGCCTA
CACTCCAACG GGTTTTCCCT GGTCCGGCAC GTGCTGCTCG GTGCCGGCCG GATGCGGCTC
GACGTGGTCA TCGAGGACTT CGGTCGGCAG CGCACCCTCG GTGAGGAACT GCTGACTCCT
ACCAAGATCT ATGCCCAGGA CTGCCTGAAG CTGATCGCTG AGGCGGAGGT CCGGGTATTC
GCCCACGTGA CCGGGGGTGG TATCCCGGGG AACCTGGTCC GGGTCCTGCC GGAGCACGTG
GACGCGGTGG TCAATCGCGC CACCTGGAAG CCGCAGCCGA TCTTCGACCT GGTGCAGTCC
AAGGGACGGA TTGAGGCCCC GGAGATGGAG GCGACGTTCA ACATGGGCGT CGGCATGTTC
GCGATCGTCT CCGCCGAGGA CGCCGACCGC GCGCTGGCCA CTCTCACCGG CCGTGGCGTG
GACGCGTGGC AGGCCGGCGA GATCATCGAA GGTACTGGCA ACGTTCAGCT GGTCGGGCAG
CACACCCGTG GCTGA
|
|---|
| Protein sequence | MTHVSERSGA GSSQTGAGGD RQPWTTATGR PVRKRSASYL DAGVSIEAGD RAVELLKSKV
KQTRRPEVMG DLGGFAGLFR LDTKKYKSPI LASSTDGVGT KLVIAQQLDI HDTVGIDLVA
MVVDDLVACG AEPLFLLDYI ATGEVVPDRV AEIGAGIADG CRYAGCALLG GETAEHPGVL
RPDEYDISAT GVGVVEESGI LSSERVEVGD VVIAMRASGL HSNGFSLVRH VLLGAGRMRL
DVVIEDFGRQ RTLGEELLTP TKIYAQDCLK LIAEAEVRVF AHVTGGGIPG NLVRVLPEHV
DAVVNRATWK PQPIFDLVQS KGRIEAPEME ATFNMGVGMF AIVSAEDADR ALATLTGRGV
DAWQAGEIIE GTGNVQLVGQ HTRG
|
|---|
| |