Gene Sterm_4108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_4108 
Symbol 
ID8599552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand- 
Start bp4382069 
End bp4382800 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content33% 
IMG OID 
Producttranscriptional regulator, RpiR family 
Protein accessionYP_003310871 
Protein GI269122694 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATTG AAAGAACTTT TAAGGGGATA AAGCTAACCA GTAACGATAA AATAATTTTG 
GATTATATTA CAAAAAATAT AGATACCTGC CTTGAAGAAG GAGTAAGGGG TGTTGCCAAA 
AACAGCTTTT CTTCCACTTC ATCTATAATG AGGCTTTCAA AAAAATTAGG ATACAGCGGT 
TTTGTGGAAT TGATTTATGA TTTGAAAAAG AAAATGACAG CAAAAAAATC AGAAAAAATA 
AATATATCTT TTTTTGACAA AATTACTTTT AATACAAGAA ATAAGTCTGA AATAGACCAG 
TTTTTAAAGC GCATTCACAG AGGAAAAATA ATGACTTACG GTGAGGGCTT TTCCGAAATA 
GCCTCGTCAT ATATGTACAG AAAGCTTTTG ACCCTTGGAA AGATAGTTTA TCTGCTCCAC 
GGGATTGATT TTGATATTTT GTGCGAAAAG TCGGCTATGA AATTTGACCT CCTGCTGATA 
GTATCAAAAT CAGGAGAAAC AAAGCACTGC ATAAAGCTGG CAAAACAGGC AAAAGAAGAA 
AATATAACAG TATGCAGTTT TACCGGTAAT GCTGCAAGCC ATCTTGCGAA ACTGTCTGAT 
ATTTCATTTA CATATAATGA CCCTCATACA TTGGACGATG ATGTATATTA TCCTAATCCG 
TTTATCGGAT TATGCATAAT AGGATTTGAA GAGCTGATAA GAAGGTATTT CGAAAAATAT 
GGTATAGATT AG
 
Protein sequence
MNIERTFKGI KLTSNDKIIL DYITKNIDTC LEEGVRGVAK NSFSSTSSIM RLSKKLGYSG 
FVELIYDLKK KMTAKKSEKI NISFFDKITF NTRNKSEIDQ FLKRIHRGKI MTYGEGFSEI 
ASSYMYRKLL TLGKIVYLLH GIDFDILCEK SAMKFDLLLI VSKSGETKHC IKLAKQAKEE 
NITVCSFTGN AASHLAKLSD ISFTYNDPHT LDDDVYYPNP FIGLCIIGFE ELIRRYFEKY 
GID