| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_4093 |
|---|
| Symbol | |
|---|
| ID | 8599537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 4359450 |
|---|
| End bp | 4360325 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | hydroxymethylbutenyl pyrophosphate reductase |
|---|
| Protein accession | YP_003310856 |
|---|
| Protein GI | 269122679 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00347618 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTA ATATAGAGAT TATCAGAGCC GAGCATATGG GATTTTGCTT TGGTGTAAGG
GAAGCAGTGG ACGAGGTACA CAGATACGTT GATATGAACA GGGGACAGAT ATATGTTCTG
GGTATGCTGG TGCATAACGA ATTCGTAATA GAAAAATTAC TTAAAAAAGG TGTTATTTTT
GTATCTGAGG AAGATGTATT AAATAATAAT ACACCTCTGA AAAGCGGAGA TATTGTAATA
ATCAGGGCAC ACGGAACAAC ACAGAATGTA CAGAAAAAGC TCCTGGAAAT TGGTGTAAAG
CTGATTGACA TGGCATGCAT TTATGTAAAG AGTGCAAGGG ATCAGGTAGT GATCTGGGAG
CAAAGAGGAT ATAAGAGTGT ATTTATAGGA GATAAAGATC ATCCGGAAGT AAAGGGAATA
ACCAGCTATG GAATAAAGCC CTTGATTTTT GGAAGCCTTG ATGAATTAAA GCAGGCAGAG
CTGGACATAA ATGAAAAATG GGTATTTTTA TTTCAGACAA CTTATAACAG ATTTATATTT
CAGGAGATAA ATGACTATAT AATAAACAGA TTCATTAATT ATAAAGTAGT AAAGACTATC
TGCGGAGCAA CACATCAGAG ACAGTCGGCG ATTGAAAAGC TGGCACAGGA AGTAGACGCA
GTTTTTATAA TAGGAAGCGA GCAGAGCTCA AATACAAAAA AGCTTTATCA GATATCAAAA
AATCTTAATG AAAAAAGTTA TCTGATTGAA AATAACGATG ATATAAAGAA ACATATGTTA
GACGGAGTAA GAAAATTAGG AGTATCTGCG GGAGCATCCA CTCCTGAAGA ATTAATAGCA
ATAATAGAAA ATAAAATAAA AGAACTGGAA GACTAA
|
|---|
| Protein sequence | MKLNIEIIRA EHMGFCFGVR EAVDEVHRYV DMNRGQIYVL GMLVHNEFVI EKLLKKGVIF
VSEEDVLNNN TPLKSGDIVI IRAHGTTQNV QKKLLEIGVK LIDMACIYVK SARDQVVIWE
QRGYKSVFIG DKDHPEVKGI TSYGIKPLIF GSLDELKQAE LDINEKWVFL FQTTYNRFIF
QEINDYIINR FINYKVVKTI CGATHQRQSA IEKLAQEVDA VFIIGSEQSS NTKKLYQISK
NLNEKSYLIE NNDDIKKHML DGVRKLGVSA GASTPEELIA IIENKIKELE D
|
|---|
| |