| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_4016 |
|---|
| Symbol | |
|---|
| ID | 8599460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 4254068 |
|---|
| End bp | 4255573 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | |
|---|
| Product | methylmalonate-semialdehyde dehydrogenase |
|---|
| Protein accession | YP_003310779 |
|---|
| Protein GI | 269122602 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.44182 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAT TGAAATTTTT TATAAACGGT GAGTGGAGAG AATCAAAAAC TGATAAGTAT
TATGATATAT ACAATCCGAG TACTGGTGAA GTAATAGCAC AAACTCCGTG CTGTACAAAG
GAAGAAGTAG AGGAAGCCGT ACAGGCAGCC AAGGACGCAT TTGAATCATG GGCGGCAATT
CCTGTAATGA AAAGAGTTCA GATTTTATAT AAATTTAGAG ATCTGCTGGA TCAAAGAATG
GACGAGCTTA CAGAAATACT GTGTAAAGAA CATGGTAAAA ACTGGGCGGA AGGACAGGGA
GATTTATTAA AGGTAAAAGA GCCCGTAGAG CTTGCATGCA GTGCTCCGTT ATTAATGATG
GGAGAATCTC TGATGAATAC TTCTACAGGT TATGATACTG TACTTTACAG AGAACCGCTG
GGGGTATTTG CAGGAATAGC TCCGTTTAAT TTCCCGGGGA TGATACCAAT GGGATGGATG
GTTCCGTTAT GTATCGCTAC AGGAAATACA ATGGTGCTGA AAGCATCAAG TACTACTCCT
ATGACAAGCT ACAAGCTTGC AGAGCTTTTT GTGGAAGCAG GACTGCCAAA AGGAGTATTA
AATATAGTGA CAAGTTCAAG AAACGAAGCA GAAATTCTGT TATCGCACCC TGATGTAAAA
GGAATCTCAT TCGTAGGATC GACATCTGTG GGACTTCATG TATATTCTAC AGGAGCTGCA
CACGGAAAAA GAGTACAGGC ATTATGCGAG GCAAAAAACC ATGCATTGGT ACTGGAAGAC
TGTGTACTTG AAAGATCTGT AAGAGGAATT ATAAACTCGG CATTCGGATG TGCAGGGGAA
AGATGTATGG CTCTTCCTAC AATATGTGTT CAGGAAAGCA TAGCTGATAA GTTTGTGGCA
AAATTAACAG AAGTGGCAAA AGAACTGAAA ATAGGACCTG CATATGATAA AACAACTGAT
CTCGGACCTG TAGTTACAGC AGATCACAGA AAATATGTGG AAGGATGGAT ACAAAAAGGT
ATAGACGAAG GAGCAAAGCT TGTTCTTGAC GGAAGAGGAG TAAGCGTACC CGGATATGAA
AACGGATTCT ATATGGGGCC TACAATTTTT GATTATGTAA CAGAAGAGAT GGAAGTAGGA
CAAAAAGAGA TATTCGGTCC GGTGTTATGT ATAAAAAGAG TAAAAGACTT CGAAGAAGGA
ATAACAATAA TGAATGCAAA TGAATTTGCA AACGGCTCTG TTATTTACAC TAGCAGCGGA
TATTACAGCC GTGAATTTGC AAGACGTACT GACGGAGGAA TGGTAGGAAT AAACGTAGGA
GTGCCGGTGC CGGTAGGATT GTTTCCGTTT AACGGACACA AGCGTTCTTT CTTTGGAGAC
CTTCATACAC TTGGAAAAGA CGGGGTAAAA TTCTTTACTG ATGCCAAAGT AGTAACAAGT
ACATGGTTTA CAGAAGAAGA TAATAAAGCT AAGGTAGACA CATGGGACGG TTCAGTAGTA
AAATAG
|
|---|
| Protein sequence | MQKLKFFING EWRESKTDKY YDIYNPSTGE VIAQTPCCTK EEVEEAVQAA KDAFESWAAI
PVMKRVQILY KFRDLLDQRM DELTEILCKE HGKNWAEGQG DLLKVKEPVE LACSAPLLMM
GESLMNTSTG YDTVLYREPL GVFAGIAPFN FPGMIPMGWM VPLCIATGNT MVLKASSTTP
MTSYKLAELF VEAGLPKGVL NIVTSSRNEA EILLSHPDVK GISFVGSTSV GLHVYSTGAA
HGKRVQALCE AKNHALVLED CVLERSVRGI INSAFGCAGE RCMALPTICV QESIADKFVA
KLTEVAKELK IGPAYDKTTD LGPVVTADHR KYVEGWIQKG IDEGAKLVLD GRGVSVPGYE
NGFYMGPTIF DYVTEEMEVG QKEIFGPVLC IKRVKDFEEG ITIMNANEFA NGSVIYTSSG
YYSREFARRT DGGMVGINVG VPVPVGLFPF NGHKRSFFGD LHTLGKDGVK FFTDAKVVTS
TWFTEEDNKA KVDTWDGSVV K
|
|---|
| |