Gene Sterm_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3948 
Symbol 
ID8599393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp4191848 
End bp4193503 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content38% 
IMG OID 
Producthybrid cluster protein 
Protein accessionYP_003310712 
Protein GI269122535 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATGT TTTGTTTTCA ATGTCAGGAG ACATTTAAGA ATCACGGATG TACAGTCAGA 
GGAGTATGCG GTAAAACTGA CGATGTTGCT AATCTGCAGG ATGCATTAAT ATTTGCTTTA
AAAGGTATGG CAAATTATTC GTCACAGTTA AGAAAGGTAA AGAAGGTTTC AAGCGAAATT
GACGGATTTT TGTTTAAGGC TCTTTTTACT ACAATAACAA ATGCAAACTT TGATGCGAAA
GATATGGTGG AAGACATAAA AAAAGCCATA GAGTACAGAA AGAGCATTAA GGCGGAACTG
GAAAAAGAAG GTGTGACGCT CGATCCTAAA TTTGAGGGAA AACCACTTAC AACATGGGAG
TTTACTACAA AAGAGGAAGC AGAAATGCTG GCTCCGAAGG TAGGAGTATT AAGAACGGAA
AACGAGGATG TAAGATCACT GAGAGAAATA ATTTTATACG GATTAAAAGG GATATCAGCC
TATGGCTTCC ATGCTTACAA TCTTGGAAAA ATAAGTGAAG AGCTTTATGC TTTTTATGAA
AAAGCACTTC TTGCTACTGA AGATGAAAGT CTTAGCGGGG AAGAGCTTAC GAATCTTGTA
TTTGAGACTG GGAAGCATGG TGTAGACGTA ATGGCTTTAT TAGATGAAGC TAATACAAGT
ACATTTGGAA ATCCTGAGAT AACAGAAGTA AATATAGGTG TAAGAAAAAA TCCTGCAATT
TTGATTTCGG GACATGATCT GAAGGACATG AAAGAGCTGC TGGAACAGAC AGAGGGAACA
GGAGTGGATG TATATACACA TTCGGAAATG CTGCCGGCAC ATTATTATCC TGAGTTCAAA
AAGTATAAGC ATCTGGCAGG GAACTACGGG AATGCATGGT ATCATCAGGT AAAAGAATTC
GAAACTTTTA ACGGACCAGT AATTTTCACT ACAAACTGTC TTGTACCGCC GAGACCTAAT
TCTACATATA ATGACAGAAT ATTTACACTA AATGCCACTG GTTATCCTGA ATGGAAAAAA
TTAGAAGCAG ATGAAAACGG AAAATTTGAC TTTACAGAAG TAATAGAACT GGCTAAAAAA
TGTGATCCTC CGAAAGAGAT AGAAACAGGA ACAATCGTAG GAGGATTTGC ACATGCACAG
GTATTTGCAC TTGCGGATAA AATAGTAGAT GCAGTAAAAT CCGGTGCAAT AAAGAAATTT
ATAGTAATGA GCGGATGCGA TGCAAGAATG AATGACAGGG AGTATTATAC AAAGTTTGCT
GAGGCTCTTC CTAAAGATAC AGTAATTCTT ACATCAGGCT GTGCAAAATA CAGATATAAC
AAGCTGAATC TCGGAGATAT CGGAGGAATA CCGAGAGTAC TTGATGCAGG ACAGTGCAAT
GATTCATACT CATGGGCAGT AGTAGCATTA AAGCTGAAAG AGATATTTAA TGCAAATGAT
ATAAATGACC TTCCTATAGA GTTTAATGTT GCATGGTATG AGCAAAAAGC AGTAATAGTA
TTGCTTGCAT TATTGTATCT TGGAATAAAA AATATACATG TAGGTCCGAC ACTGCCTGCA
TTTATATCAC CGAGCGTGGC AAAGCTTCTG AACGAGCAGC TAGGTCTTAC AGGAATAACA
GATGTAGAAA CAGATTTAAG AGAGTTTTTT GCTTGA
 
Protein sequence
MSMFCFQCQE TFKNHGCTVR GVCGKTDDVA NLQDALIFAL KGMANYSSQL RKVKKVSSEI 
DGFLFKALFT TITNANFDAK DMVEDIKKAI EYRKSIKAEL EKEGVTLDPK FEGKPLTTWE
FTTKEEAEML APKVGVLRTE NEDVRSLREI ILYGLKGISA YGFHAYNLGK ISEELYAFYE
KALLATEDES LSGEELTNLV FETGKHGVDV MALLDEANTS TFGNPEITEV NIGVRKNPAI
LISGHDLKDM KELLEQTEGT GVDVYTHSEM LPAHYYPEFK KYKHLAGNYG NAWYHQVKEF
ETFNGPVIFT TNCLVPPRPN STYNDRIFTL NATGYPEWKK LEADENGKFD FTEVIELAKK
CDPPKEIETG TIVGGFAHAQ VFALADKIVD AVKSGAIKKF IVMSGCDARM NDREYYTKFA
EALPKDTVIL TSGCAKYRYN KLNLGDIGGI PRVLDAGQCN DSYSWAVVAL KLKEIFNAND
INDLPIEFNV AWYEQKAVIV LLALLYLGIK NIHVGPTLPA FISPSVAKLL NEQLGLTGIT
DVETDLREFF A