Gene Sterm_3932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3932 
Symbol 
ID8599377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand- 
Start bp4171982 
End bp4172680 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content26% 
IMG OID 
Productputative phage repressor 
Protein accessionYP_003310696 
Protein GI269122519 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.381498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATA TGGAGCAATT GAGAGAACTG ATCTCAAAGA AAAGGAGAAG TAAAAATTTA 
GCACGTGAGA AAGTATCGGA ATTACTTAAA ATAGAAGGTA TAGAATACGC CGAATCTTCA 
TTGACTAGAT TTGAAAATGG AAAGATAAAA AATATAAGAA TTGAAATTTT GAATGCCCTA 
TGCGACATAT TAGATATCGA TAAAAAAGAA GCCTTCAGTT TAGCAGGATT AGATAATAAA 
AATATATTAT CTGAAAATGA AGGAATTATA ATAAATAATA GAAAAGAAAT TATATTAAAG 
ATATATAATT TCGATTCAAG TAGAGATGGT TTGTTAAATT TTAATGATTA CATAGAGGTG 
TCTCAAGTAG TTGATACCAA TGAAGTAAAA GAATTTAAAA ATAATATTTC CGTCAATATT 
TCAGGAAATT TAATGCAGCC GTTTTTCTTC GAAGGAGACA AAATACTCAT AAAAAAAGAA 
GAATTGACTG TTTGGGGAGA TTTGAATAGG AAAATAATTT TATATAAGTT AGATAATAAG 
TTTTATTTAC GTAAAGTTTT ATTTATAGAT GGCAAAGGAT ATTTAGAAGC TTTTAATAAA 
GATGTGTACG GTAAATTTGA AATAGATTCT AAAGTTAAAT ACATAGGTAG AGTAGTTAAG 
CAATTTAATA CAAGAGATCT TAGTAATATT GAATTTTAA
 
Protein sequence
MENMEQLREL ISKKRRSKNL AREKVSELLK IEGIEYAESS LTRFENGKIK NIRIEILNAL 
CDILDIDKKE AFSLAGLDNK NILSENEGII INNRKEIILK IYNFDSSRDG LLNFNDYIEV 
SQVVDTNEVK EFKNNISVNI SGNLMQPFFF EGDKILIKKE ELTVWGDLNR KIILYKLDNK 
FYLRKVLFID GKGYLEAFNK DVYGKFEIDS KVKYIGRVVK QFNTRDLSNI EF