Gene Sterm_3885 details

Gene Information

• Locus tag: Sterm_3885
• ID: 8599331
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 4135544
• End bp: 4136290
• Gene Length: 747 bp
• Protein Length: 248 aa
• Translation table: 11
• GC content: 33%
• Product: cell wall hydrolase/autolysin
• Protein accession: YP_003310650
• Protein GI: 269122473

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACATA GATATAAAGA CCCGAAAGAA TTAATAGGGG TAGAATTTGA GGAATTAGGG 
AACACTTATA AAATAACCGG AATAGGAGAA ATAACAGAGG AATTCATGAC ACTGTTTACA 
GAAAAAGTAA AAGAGGAAAT AATTAATTGG AATGGAAAAG TACTTATTGA TGTAGGTCAC 
GGTGGAACCA AAACTACATC AAGTGGCAAA AAATACAGAG ATTACGGGGC TGTAAATGAG 
AAGTCAAAGG TAGATGAATT TACATGGAAT CATGACTTTG TTATGAGGTA TTTAATTCCA 
GAATTAAATG CATCTGGAAT AGCAAATAAA GTAGTTTTAA GAAGCACAAA TATAACAAAA 
CTTGTTACTG ATCTAAATAA AGAAGCTGGA AAAGATGATA TTATCCTATC TTTTCACCTA 
AACAGTGATA TAAAAGCTTC TGGAACAGAG ACATTGTACT GGCATACAAG TGAAAAAGGC 
AAAAAGCTTG CAGGACTAAT TCAAAAAGGA TTGGTAGGAG TTTTAGGGTT ACCAGACAGG 
GGAATCAAAA TAAGAAGAAA ACCTTTAGAT AATGCTGATT CATTGAATCA AAGAGGGTGG 
ACAATGTTTA AAGATACCAA AGTTCCGTTT GTAATGTTAG AAAGTTTCTT TATTACAAAT 
GACGAGGATC TCAAAAGAGG AAATGAAAAA AAGGCAGAGT TAGCAAAAGC TGTGGTATCA 
GCAATAAAAG AATATATAAA GGGCTAG 

 

Protein sequence

MEHRYKDPKE LIGVEFEELG NTYKITGIGE ITEEFMTLFT EKVKEEIINW NGKVLIDVGH 
GGTKTTSSGK KYRDYGAVNE KSKVDEFTWN HDFVMRYLIP ELNASGIANK VVLRSTNITK 
LVTDLNKEAG KDDIILSFHL NSDIKASGTE TLYWHTSEKG KKLAGLIQKG LVGVLGLPDR 
GIKIRRKPLD NADSLNQRGW TMFKDTKVPF VMLESFFITN DEDLKRGNEK KAELAKAVVS 
AIKEYIKG