| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_3842 |
|---|
| Symbol | |
|---|
| ID | 8599288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 4076847 |
|---|
| End bp | 4078454 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_003310607 |
|---|
| Protein GI | 269122430 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.298652 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TATTTTTAAC AATGTTACTA TTACTGATTT TTATAGTATC ATGCGGCAGT
AAAAACGCCG AAGGAACAAA AAAAAGCGGT GATATAATAA AAATTGCAGT TAATCTGCAG
TCAGAACCGA AATCACTGGA TCCGCAGTTA GCATCAGATG CTTCCGGAAT AACAATAGAT
TCCCTTATCT ATGAAGGACT GACAAGACTG GATCAGGAAG GAAAAGTGGT TCCTGCTGCG
GCCGAAAGCT GGGAGATAAG TGAAGACGGT CTTAAATGGG TATTTCATTT GAGAAAAGAT
ATGAAGTGGG CAAATGGTGA TCCTGTAACA GCAAAAGATT TTGCATTCGG ATGGCTACGG
GCACTTGATC CTCAAACTGC TTCAGAATAT GCATACGAGC TCTATTATAT AAAGGGAGCA
AAAGAATATA ACGAAGGAAA AGGAAAAAGA GAAGATGTGG CAATAAAAAC TCCTGATGAC
AATACTTTGG AGATAGAGCT GAATCAGCCT ACACCATATC TGCTTTCATT ATTTTCATTT
CCTACATATT ATCCGGTAAA TGAAAAATTT TATAATGAAG CCGGAAAGGA TTTTTCGCTG
TCAGCTGACA AAATAATGGG GAACGGACCT TATGCAGTGA AAAAATGGAC TCCTGAGACA
AGTATTCTGC TTGCTAAAAA TGAAAATTAT TGGAATAAGG ATAATATTCA TCTTGATGAG
CTGGAGATAA AAATGATTTC TGACCAGCTT GCTGCACTGA ATGCATTTAA AAACGGAGAG
CTGGATATTA CGGAGCTGTC AGGCGAGCAG CTGATAGAAT ACAGAGATGA TAAAAGATTA
TATTCATATA ATAAAGGTTC TATAAAGTTT TTAAAATTCA ATGTTAAGAA TAAGCTTCTT
GCTAATCAGA AAATAAGAGA AGCTGTTTCT ATGGCAATTG ACAGAGATGA AATGACAGAA
AATGTATCTA AAGGAAGCTT TATGCCTGCT TACGGATTCG TCCCTGAAGG ATACGGCGGG
TCAGCCGGCG GAGATTTCAG AAAAGAAAAC GGAGATATAT TTGAAAAATA TAATCCTGAA
AAAGCAAAAC AGTTATTTCA GGAAGGATTA AAAGAAGTAG GAGAAACCGG GACTCCTACA
CTGACTTTGA TGATTTATGA AGCACCTGAT AATCAAAAAC TGGCTGAGTA TATTCAGGAA
AAATTAAGAA CAGTTCTCGG ACTTGACGTA AAAATAGAGA CTAATACTTT CAAAATATTC
TCGCAAAATG AAACACAGGG TAACTATGAT ATGGATCTGT CTCAATGGGG GCCTGATTAT
CTGGATCCTA TGACATATAT GGATATGTGG GTAACAAACG GCGGAAACAA TAAGACAAAC
TGGACAAATC CTGAATATGA CAGATTAATG GACACCGCTA AAAACAGCGT GGATAATTCC
GTAAGAATGA AGAGCATGAT GGAAGCAGAA AAAATATTAG GTAAGGAACT TCCTATTGCT
ATGCTTACAT ATAATATAAA AAATATGCTT GTAAACGAAA GAATAAAAGA CATGAATTTT
ACTAAAATTG CATCTGGATA TGACTTTTAT TATGTAAGAG TGGAATAA
|
|---|
| Protein sequence | MKKIFLTMLL LLIFIVSCGS KNAEGTKKSG DIIKIAVNLQ SEPKSLDPQL ASDASGITID
SLIYEGLTRL DQEGKVVPAA AESWEISEDG LKWVFHLRKD MKWANGDPVT AKDFAFGWLR
ALDPQTASEY AYELYYIKGA KEYNEGKGKR EDVAIKTPDD NTLEIELNQP TPYLLSLFSF
PTYYPVNEKF YNEAGKDFSL SADKIMGNGP YAVKKWTPET SILLAKNENY WNKDNIHLDE
LEIKMISDQL AALNAFKNGE LDITELSGEQ LIEYRDDKRL YSYNKGSIKF LKFNVKNKLL
ANQKIREAVS MAIDRDEMTE NVSKGSFMPA YGFVPEGYGG SAGGDFRKEN GDIFEKYNPE
KAKQLFQEGL KEVGETGTPT LTLMIYEAPD NQKLAEYIQE KLRTVLGLDV KIETNTFKIF
SQNETQGNYD MDLSQWGPDY LDPMTYMDMW VTNGGNNKTN WTNPEYDRLM DTAKNSVDNS
VRMKSMMEAE KILGKELPIA MLTYNIKNML VNERIKDMNF TKIASGYDFY YVRVE
|
|---|
| |