Gene Sterm_3828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3828 
Symbol 
ID8599274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand- 
Start bp4061603 
End bp4062337 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content32% 
IMG OID 
ProducttRNA pseudouridine synthase A 
Protein accessionYP_003310593 
Protein GI269122416 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA TAAAAATAGT TTATGAATAT GACGGATCAA AATTTTCAGG ATTTCAGAGA 
CAGCTAAACA AAAAAACAGT GCAGGGAAGT ATAGAGGAGG TAATCAAAAA TTACTTTAAC 
GAGGAAGTAA ATCTTCTTTC ATCGGGAAGA ACAGACAAAG GCGTTCATGC ATTGGGACAG 
GTTTCTAATT TTTTTATGGA AAAAAGTATA TCTCCTGATA TTATAAAAGG TATATTAAAC 
AGAGCTCTCT CAGGGAAAAT AAGAGTAACA GATGCCAAAG AAGCTGACAG TGATTTTCAT 
GCAAGATTTT CTGCCAAAAC CAGAACTTAT CTTTACATAA TGAAGCTTAA AGATGAAATT 
ACCCCCTTTG AAAGCAGTTA TGTTTCAGCC CTTGACGGGA AAATTATTCC TGAAAAGCTG 
CAAAAAATTA TGGAGCCGTT TATAGGAAGG CATAATTTTG ACAGCTTTAG AAAAAAAGAT 
AAAGATAATA AAAATCCTGA AAGAGAAATC AATAATATCA GATGCTATGA AGAGGATAAA 
AGGCTGTTTA TCGAAATAGA AGGAAAGTCA TTTTTGAAGA CAATGATAAG AATTATGATA 
GGAAGCGCAC TGGCTGTGTA TTTTGAAAAG AGAAACCCGG ATTATATATG TGATAAACTT 
GATAATCCTG ATTCCGACGG TGAAAAAATA CTTGCTCCGT CAGAGGGTTT ATACTTATAT 
AAAGTAAATT ATTAA
 
Protein sequence
MKNIKIVYEY DGSKFSGFQR QLNKKTVQGS IEEVIKNYFN EEVNLLSSGR TDKGVHALGQ 
VSNFFMEKSI SPDIIKGILN RALSGKIRVT DAKEADSDFH ARFSAKTRTY LYIMKLKDEI 
TPFESSYVSA LDGKIIPEKL QKIMEPFIGR HNFDSFRKKD KDNKNPEREI NNIRCYEEDK 
RLFIEIEGKS FLKTMIRIMI GSALAVYFEK RNPDYICDKL DNPDSDGEKI LAPSEGLYLY 
KVNY