Gene Sterm_3533 details

Gene Information

• Locus tag: Sterm_3533
• ID: 8598979
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 3745652
• End bp: 3746470
• Gene Length: 819 bp
• Protein Length: 272 aa
• Translation table: 11
• GC content: 34%
• Product: NLPA lipoprotein
• Protein accession: YP_003310298
• Protein GI: 269122121

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.16791
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA GAAATTTATT ACATTTAATC ACATTACTGG TTCTGGTATT TTTTATCACA 
GGATGCGGAG CGAGATCAGG GAAAAAATAC AGAGTCGGTA TAAACGGTTC TACTTCCAGA 
CAATGGGAAC ACATAAAGAA AGAAGCTGCT AAAAAAGGGA TAAATCTGGA AATAGTTTAT 
TTTTCAGACT ATGTTCAGCC CAACAGAGCT CTTGTAGATA AGGAAGTAGA TATAAATGCC 
TTCCAGACTC TTTCGTTCCT AAATACATTT AATGAAACAA ATAAACAGGA TATAACTCCT 
ATAGGAACTA CAATTCTGGC TCCAATGGGA ATTTATTCAA AAAAGTTAAA GTCTCTTGAT 
GAGCTGCCGG AAAAAGCAAA AGTAACTATT CCAAATGATC CCTCTAATCA GGGAAGAGCA 
TTAAAGCTTT TGGAAAAAGC AGGATTAATA AAATTGAAAG ACAGTAATGG AAAAATAATA 
AGCAATAATG ACATTGCCGA AAATCCAAAA CAGCTGGAAA TAATTCCGCT GGCTGCTAAT 
CAGCTTCCTC AGACTCTGAA TGACACCGAA ATATCAGTAA TTAACAACGG AGTGGCAGTA 
GATGCCGGCT TCTCACTTAA TCAGGCTATT TTCAAGGAAG ATAAGCTGGC AAAAGATTAT 
ATAAATGTTA TTGCTGCGAG ACAGGACAAT AAAAGTGATG AAAATCTTCT GGAGATAGTA 
AAATTATATC AGAGTGATGA TGTAAAAAAA ATCATAGAAG AGGAAACAAA AGGAAACTCT 
ATTCCTACAT TTATACCATT ATCAGAGATA GGTTTTTAG 

 

Protein sequence

MKKRNLLHLI TLLVLVFFIT GCGARSGKKY RVGINGSTSR QWEHIKKEAA KKGINLEIVY 
FSDYVQPNRA LVDKEVDINA FQTLSFLNTF NETNKQDITP IGTTILAPMG IYSKKLKSLD 
ELPEKAKVTI PNDPSNQGRA LKLLEKAGLI KLKDSNGKII SNNDIAENPK QLEIIPLAAN 
QLPQTLNDTE ISVINNGVAV DAGFSLNQAI FKEDKLAKDY INVIAARQDN KSDENLLEIV 
KLYQSDDVKK IIEEETKGNS IPTFIPLSEI GF