Gene Sterm_3476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3476 
Symbol 
ID8598927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3680366 
End bp3681145 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content39% 
IMG OID 
Productphosphotransferase system PTS sorbose-specific IIC subunit 
Protein accessionYP_003310246 
Protein GI269122069 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.482884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAAG TATTTTTAAT TTTTTTAATT GCTTGTTTTG GATATAGTGA TTATTTTACA 
GGAAAATCAC TGCAAACAAG ACCTCTGGTA TTAGGTCCTT TGGTAGGCTT AATTATGGGA
GATTTACAGG CAGGTTGTGT TATTGGTGCA ACACTAGAAC TTGCTATGAT GGGAGCAGTA
GGTGTTGGAG CAGCACTGCC TCCTGAAGTA GTATCCGGCG GTATTCTTGG AACTGCATTT
GCAATTGCAG GTCATAAAGA TGCAGGGATG GCTATTGCTT TAGGATTACC TATTGCCATG
CTTGTTATGT TACTTCGTAA TTTTTTATTT ATTGTGGTTG TTCCGTTGTT TGCTAACCGG
GCAGATAAAT ATGCAGAAGC CGGAGATATA AAAGGAGTAT CAAGAATGCA TTGGTTTGGA
GGTATTTTTG GTATGTATCT TCCGCTCGCT CTTCTTGTTG CTGTTTCTTA TTATCTTGGC
ATCAGTGTTA TGGAACAGGT GCTTAATACA ATTCCTCAAT TTGTACAGGA TGGTCTGAGC
ATCTCAGCAG GAATTCTTCC GGCACTAGGA TTTGCTATTC TTCTCCGAAT GATTCTGAAT
AAGAAAATTG CGGCATTCCT GGTTATTGGT TTTTTGCTCA CTGCTTATAT GAATCTCCCT
GTTCTCGGAG TAGCTATCAT GGCAATATGT ATTATTATGC TGATCTCTTA CGGAAATCTT
GGAAATAAAA CCGGTATTAT TAGTGCTGGA GAAATGGAGG CGGAAGATGA TGACTTCTAA
 
Protein sequence
MVKVFLIFLI ACFGYSDYFT GKSLQTRPLV LGPLVGLIMG DLQAGCVIGA TLELAMMGAV 
GVGAALPPEV VSGGILGTAF AIAGHKDAGM AIALGLPIAM LVMLLRNFLF IVVVPLFANR
ADKYAEAGDI KGVSRMHWFG GIFGMYLPLA LLVAVSYYLG ISVMEQVLNT IPQFVQDGLS
ISAGILPALG FAILLRMILN KKIAAFLVIG FLLTAYMNLP VLGVAIMAIC IIMLISYGNL
GNKTGIISAG EMEAEDDDF