Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_3476 |
Symbol | |
ID | 8598927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 3680366 |
End bp | 3681145 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | phosphotransferase system PTS sorbose-specific IIC subunit |
Protein accession | YP_003310246 |
Protein GI | 269122069 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.482884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTAAAAG TATTTTTAAT TTTTTTAATT GCTTGTTTTG GATATAGTGA TTATTTTACA GGAAAATCAC TGCAAACAAG ACCTCTGGTA TTAGGTCCTT TGGTAGGCTT AATTATGGGA GATTTACAGG CAGGTTGTGT TATTGGTGCA ACACTAGAAC TTGCTATGAT GGGAGCAGTA GGTGTTGGAG CAGCACTGCC TCCTGAAGTA GTATCCGGCG GTATTCTTGG AACTGCATTT GCAATTGCAG GTCATAAAGA TGCAGGGATG GCTATTGCTT TAGGATTACC TATTGCCATG CTTGTTATGT TACTTCGTAA TTTTTTATTT ATTGTGGTTG TTCCGTTGTT TGCTAACCGG GCAGATAAAT ATGCAGAAGC CGGAGATATA AAAGGAGTAT CAAGAATGCA TTGGTTTGGA GGTATTTTTG GTATGTATCT TCCGCTCGCT CTTCTTGTTG CTGTTTCTTA TTATCTTGGC ATCAGTGTTA TGGAACAGGT GCTTAATACA ATTCCTCAAT TTGTACAGGA TGGTCTGAGC ATCTCAGCAG GAATTCTTCC GGCACTAGGA TTTGCTATTC TTCTCCGAAT GATTCTGAAT AAGAAAATTG CGGCATTCCT GGTTATTGGT TTTTTGCTCA CTGCTTATAT GAATCTCCCT GTTCTCGGAG TAGCTATCAT GGCAATATGT ATTATTATGC TGATCTCTTA CGGAAATCTT GGAAATAAAA CCGGTATTAT TAGTGCTGGA GAAATGGAGG CGGAAGATGA TGACTTCTAA
|
Protein sequence | MVKVFLIFLI ACFGYSDYFT GKSLQTRPLV LGPLVGLIMG DLQAGCVIGA TLELAMMGAV GVGAALPPEV VSGGILGTAF AIAGHKDAGM AIALGLPIAM LVMLLRNFLF IVVVPLFANR ADKYAEAGDI KGVSRMHWFG GIFGMYLPLA LLVAVSYYLG ISVMEQVLNT IPQFVQDGLS ISAGILPALG FAILLRMILN KKIAAFLVIG FLLTAYMNLP VLGVAIMAIC IIMLISYGNL GNKTGIISAG EMEAEDDDF
|
| |