Gene Sterm_3260 details

Gene Information

• Locus tag: Sterm_3260
• ID: 8598713
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 3422030
• End bp: 3422794
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 36%
• Product: transcriptional regulator, DeoR family
• Protein accession: YP_003310032
• Protein GI: 269121855

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0117274
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGGCTT CAGAAAGATT AATGTATATA AAACAACAGC TGGACAGAAG AAAGGTGCTG 
AATCTGAGGG ATATAACCAG TGAGCTGAAT GTGTCAGAAT CTACCATCAG AAGAGATTTT 
GAAGAGCTGG AAAAGCAGGG TGTGCTGAAA AGAGTTCACG GCGGGGTTAT CAAAGCAAAA 
ATGGAATCTA TATTATCTGA TACTATGGAG CTTACCATGG ATGAAAAAGC AATACTGAAT 
ATGGAAACAA AGAAAAAGAT ATGTTATGAA GCTTCTAAGC TGGTGAAAGA CGGAAACTGT 
GTCTTTGTAG ATGGCGGGAC AAGCCTTATG TATATGCTTG ACTATTTATG TGATAAAAAT 
GTTAAGATAG TAACACACAG CGTTCTGAAT GTTCATAACA TACTTAATTC AAAAGCTGAG 
ATAATAGTAA TAGGCGGAAA ATATATCCCT AATTATAAAA TGAATGTAGG GCCTATTTCC 
ATAGAGACAA TGGAAAAGTT TAATTTTGAT TATTCATTTA TCGGCTGTAC AGGTATTGAC 
CTTTCCGAGC GTACTGTCTT TACTGCTGAT ATGGAAACTG CTGCTATAAA ACAGATAGCC 
ATAAAAAATG CTTTAAGCAG TTATCTTTTG ATAGATTCCA GCAAGCTGGA CGTAAGAGGT 
TTTTACAAAT TTTCAGATTT AAACAGTTTT GATGCCGTAT TCACTGATGA ATACCCTGAT 
GATGCTGAGA AAATAGAGAA TGTAGTCGTA TGTAAGAATA ACTGA 

 

Protein sequence

MLASERLMYI KQQLDRRKVL NLRDITSELN VSESTIRRDF EELEKQGVLK RVHGGVIKAK 
MESILSDTME LTMDEKAILN METKKKICYE ASKLVKDGNC VFVDGGTSLM YMLDYLCDKN 
VKIVTHSVLN VHNILNSKAE IIVIGGKYIP NYKMNVGPIS IETMEKFNFD YSFIGCTGID 
LSERTVFTAD METAAIKQIA IKNALSSYLL IDSSKLDVRG FYKFSDLNSF DAVFTDEYPD 
DAEKIENVVV CKNN