| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_3129 |
|---|
| Symbol | |
|---|
| ID | 8598583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 3280064 |
|---|
| End bp | 3281839 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003309902 |
|---|
| Protein GI | 269121725 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.409554 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA TTATTTCAAA TTTAAAACGT CTCGGAAAAT ATATAACTCC TTACAAGGGA
TATTTTATTC TGTCATTGCT GCTTACTGTC ATTGCTGTCG CAGCTAACTC GCTCATTCCT
TTTATCATAG GACTTGCTGT TACAGAAATG GCTTCCAATG TAGCCGATAT GCTGAAAGGC
ATAGAAGGAG CCGGAGTTAA CTTCCCGTAT GTCGGTAAAA TAATCATAAT AACTTTAGTG
ATCGGCTTAT TAAATCAGCT TGCCACATAT TTTTCAAGCT TTTTTATGAC TAATGTGGTA
CAGGGAAGTA TGAAAGATCT GAGAACTGAT ATTGATGAAA AAATAAACAG ACTGCCTATT
TCATATTTTG ACAGAAACCA GCAGGGAAAT ATTCTGAGCA GAATTACAAA TGATGTAGAT
ACTATAAGCA ATGCACTTCA GCAAAGTCTT ATACAGGTTG TTACTTCCAT TTTAGGAATC
ATATTATCAT TAATTATGAT GCTTATTTTA TCTGTTCCTA TGACCTTGAT TGCTGTATTG
ATAATACCTT TGTCTATTAT AATATCAAAG GTTATCATAA AAAAATCCCA GAAATATTTC
AAAGAGCAGC AAAATTCACT GGGAAACCTG AATGGTTATG TTCAGGAGGC TTATACAGGA
TTCTCTGTTA TTAAGCTTTA TAATAAAGAA AATGACACAC TGGAAGAATT TAAAAATATA
AATCACAGAC TTGCAGGTTT TTCTTTTAAG GCACTTTTTA GCTCTGCACT TATAAATCCC
CTTGTAGGTC TGGTTGTTAA CCTGTCTTAT ACCAGTATGG CTGTATTGGG AAGTTATTTC
GTTATTTTTG GTACTATGAC AATAGGCGGA CTGCAGGCGT TCATACAATA TATCTGGCTT
ATAAATCAGC CGATCAGTCA GATCACACAG CTTACAGGAA TTATACAAAG CTCGGGAGCC
GCTTCGGAAA GAGTTTTTGA AATACTCGAC GAAGAGGAAG AAGCTCCTGA ACCTGAAAAT
GCTTTATTTC CTGAAAAAGT TGAAGGAAAT ATAAGTTTTG AAAATGTTTA TTTCAGTTAT
AATAAAGAAA ATGAACTGAT AAAAGACCTC AGTTTTCAGG TAAAAAGCGG TCAGACAGTG
GCTATAGTAG GTCCTACGGG GGCAGGAAAG ACTACACTTA TTAATCTGCT TATGCGTTTT
TACGATATAG ACAGCGGTTC AATAAAAATA GATGGTGTGG ATACCAGAGA TGTGAAACGT
TCTGACGTTC GTTCTCTGTT TGGTATGGTA TTGCAGGATG CATGGCTTTA TCATGCAAGT
ATTTCGGAAA ATATACGTTT TGGTAAGCTT GATGCTACGG AATATGAAGT AGTCGATGCC
GCCAAAACAG CCAATGTACA CCACTTTATC AGAACACTGC CAAACGGATA TGAAATGGTT
CTTAATAAAG AAGCAAGCAA TATTTCTCAG GGGCAGAAGC AGCTTTTGAC TATAGCACGT
GTTGTTATTG CAGATCCTAA GTTTCTTATT CTTGATGAAG CTACAAGCTC TGTAGATACA
AGACTTGAAG TCCTTATTCA GAAAGCCATG AAAAAAGTAA TGAACGGACG TACAAGCTTC
GTTATTGCAC ACCGTTTATC TACTATAAGA GATGCTGATC TGATTTTGGT TATGAATCAG
GGACAGATCG TAGAACAGGG AACACACGAA ACTCTTCTGG CAAACAACGG TCTTTATGAA
AAGCTTTATA ACAGCCAGTT TGAAGAGGAT GAATAA
|
|---|
| Protein sequence | MKKIISNLKR LGKYITPYKG YFILSLLLTV IAVAANSLIP FIIGLAVTEM ASNVADMLKG
IEGAGVNFPY VGKIIIITLV IGLLNQLATY FSSFFMTNVV QGSMKDLRTD IDEKINRLPI
SYFDRNQQGN ILSRITNDVD TISNALQQSL IQVVTSILGI ILSLIMMLIL SVPMTLIAVL
IIPLSIIISK VIIKKSQKYF KEQQNSLGNL NGYVQEAYTG FSVIKLYNKE NDTLEEFKNI
NHRLAGFSFK ALFSSALINP LVGLVVNLSY TSMAVLGSYF VIFGTMTIGG LQAFIQYIWL
INQPISQITQ LTGIIQSSGA ASERVFEILD EEEEAPEPEN ALFPEKVEGN ISFENVYFSY
NKENELIKDL SFQVKSGQTV AIVGPTGAGK TTLINLLMRF YDIDSGSIKI DGVDTRDVKR
SDVRSLFGMV LQDAWLYHAS ISENIRFGKL DATEYEVVDA AKTANVHHFI RTLPNGYEMV
LNKEASNISQ GQKQLLTIAR VVIADPKFLI LDEATSSVDT RLEVLIQKAM KKVMNGRTSF
VIAHRLSTIR DADLILVMNQ GQIVEQGTHE TLLANNGLYE KLYNSQFEED E
|
|---|
| |