Gene Sterm_3118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3118 
Symbol 
ID8598572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand- 
Start bp3266651 
End bp3267364 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content34% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003309891 
Protein GI269121714 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.180499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAAT ATAAAGAAAT AGCCCAGGAC TTAAGGGATA AAATTGTAAA CGGAATATAT 
AAAGTTAATG AACAGCTTCC CTTTGAGAGG GAAATGAGTA TAGATTATGA TGTCAGCAGA 
ATTACTATAA GAAAAGCCGT AGATCTTCTG GTAGCAGAGG GGCTGATAGT AAAAAGACGC 
GGATCAGGGA CTTTTGTAAA GGATATAAAT GATGATGAAG CCATAGAAAT AGCCATGAAA 
AAGCAATTTT TAGGATTCAG CACCACACAT TCGGATCATA AGGTAAAATC TAAAATTATC 
AAATTTAAGA TTGTTAATCC CGATGAGAAA ATAGCAAATA AACTAAAAAT AGGAACAGAT 
GAATTTATTT ATCATGTTGA GAGAATACGT TATTCTGATA ATATTCCCTA TGTTATGGAA 
AAAACGTTTA TGCCGATAAC ACTGATTCCC GGATTACAGA AAAAAAATCT GGAGTCCTCT 
GTTTATGATT ATATAGAAAA TGTTCTGAAG CTAAAAATTC AAAGCTCGCA CAGAACAATA 
AGAGCAGATG TTCCCACGGA AAAGGAACAG AAATATCTTA AGATAGACAG GTATCTTCCT 
GTTTTGGAAG TGGAGCAGGT TGCCTTTCTG AGCAACGGAC AGGCTTTTGA ATATTCAATA 
TCAAGACATA GAAGTGATAA AGCAGAGTTT AAGATGATAA ATATAAAAGA GTAG
 
Protein sequence
MLKYKEIAQD LRDKIVNGIY KVNEQLPFER EMSIDYDVSR ITIRKAVDLL VAEGLIVKRR 
GSGTFVKDIN DDEAIEIAMK KQFLGFSTTH SDHKVKSKII KFKIVNPDEK IANKLKIGTD 
EFIYHVERIR YSDNIPYVME KTFMPITLIP GLQKKNLESS VYDYIENVLK LKIQSSHRTI 
RADVPTEKEQ KYLKIDRYLP VLEVEQVAFL SNGQAFEYSI SRHRSDKAEF KMINIKE