Gene Sterm_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1978 
Symbol 
ID8597444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp2106854 
End bp2108050 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content34% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003308764 
Protein GI269120587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0514587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAA AAGAAATGAC ACTAGGTGAA ATTGTATCAA AATATCCTTC TTCGGTAAAT 
ATTTTAAAAT CGAAAAATAT AAGCGGGTTT GATGACAGCT CCAAGTCAGC CCTTCTAAAT
AAATTAACTC TTGAGATGGC AGCAAAAACA AAAAAAATAA ATCTGGAAAT ACTTCTGGAT
ACGCTGAATT CTTCATTTGA TACATATGAT GCAGATATTA CCGCAGAAAC CAGAGAATAT
AAAACTGGGG GAACAGATGT TTCAGGGCTT CTTCCCTGCC CCATAAGACT TCCTCTTTTG
GAAGCCTTCA AAAAATTTGA TTCTGATAAT CCTGAAATAA AGCTGAATTA TGATTTGAAA
TCTGCATCAT CAGGCTCAGG ATGGATGGAA GATCTTATAA AAGACAATGA TTTCTCAAAA
GTACCTGATA TATTTATCTC TACAGGCTTT GAACTGTTTT TTGGCCGGAA TCTGAAAAAC
AGAATAAAAG AAGAATCTGT ATTTAAAGAT AAAACAGGAC TTGAAAAATA TAATAAAATA
TTTGATAATA CAGGTCTGAA GGATCCATAC GGAAATTATG CTGTGATAGG TACAGTACCT
GCAGTTATGC TTGTTAATCC GTCAGAGCTG AAAGGAAGAA AATGTCCGGA AACATGGGAA
GATCTTTTGA GCCCTGAATT TGAAAAAAGC ATTAGTATTC CAATGGGTGA CCTTGATTTA
TACAATGCTG CTCTTATCAC CCTGCACAGC AGATTCGGCT ATGACGGGAT CAGAAAATTA
AAAAATAATT TTCTTGACAG TCTTCATCCT TCACAAATGC TTAAAGCAGA TAAATTAAAG
GCAAATAAAC CGGCAATAAC AATAATACCG TATTTTTTCA CCAAGATGCT GCCGGAAAGA
TCGAAAATGT TTGTAAACTG GCCCAAAGAC GGAGCTATAA TTTCACCTAT ATTTATGCTT
ATTAAAAATC GTGAAAGTGC TTCTCTTGAT AAAACAGCAA AATTTCTTTC AAGCAAAGAA
ACCGGGGAAA TACTTTCAAA ACAGGGATAT TTTCCAAGTG TACATCCAGA TGTGGAAAAT
AATGTCGAAG ACAGAAAATT TCTCTGGGCA GGCTGGGATT ATTTATATGA AAATGACATA
GATCAGATAC TTGACAACTG TACAAAAATA TTAATTGAAA ATACTCAGGA GGTATAA
 
Protein sequence
MIKKEMTLGE IVSKYPSSVN ILKSKNISGF DDSSKSALLN KLTLEMAAKT KKINLEILLD 
TLNSSFDTYD ADITAETREY KTGGTDVSGL LPCPIRLPLL EAFKKFDSDN PEIKLNYDLK
SASSGSGWME DLIKDNDFSK VPDIFISTGF ELFFGRNLKN RIKEESVFKD KTGLEKYNKI
FDNTGLKDPY GNYAVIGTVP AVMLVNPSEL KGRKCPETWE DLLSPEFEKS ISIPMGDLDL
YNAALITLHS RFGYDGIRKL KNNFLDSLHP SQMLKADKLK ANKPAITIIP YFFTKMLPER
SKMFVNWPKD GAIISPIFML IKNRESASLD KTAKFLSSKE TGEILSKQGY FPSVHPDVEN
NVEDRKFLWA GWDYLYENDI DQILDNCTKI LIENTQEV