Gene Sterm_1963 details

Gene Information

• Locus tag: Sterm_1963
• ID: 8597429
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 2094538
• End bp: 2095248
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 36%
• Product: Pirin domain protein
• Protein accession: YP_003308749
• Protein GI: 269120572

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.210241
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAAGAA GATTACCAGT AGAAAAAATG GGAGAATCAA ATTTAGGATG GTTAAGAAGT 
AAATTTCACT TTTCATTTGC TGAATATTAT AATGAGAAAA ATATTAATTT TGGTGTATTA 
AGAGTAATAA ACGATGATTA TATAGCTCCG GGAACTGGTT TCCCGACACA TCCGCACAGG 
GATATGGAAA TAATATCATA TGTGATAGAG GGAAAACTGA CTCATAAGGA CAGTATGGGT 
AACGAATCTA CTCTTGAAAG AGGAGAAGTA CAGTATATGA GCGCAGGAAC AGGAGTTACA 
CATTCAGAGT ATAATAAACA TGCGGAGGAT ACAAGAATTC TACAGATATG GGTTCTTCCG 
GACAGAAAAG GACATACTCC TAATTATGGC GAGTATAAGT TCAAATATGA AGACAGAATA 
GGAAAATGGC TGCACTTTGT ATCGTCAAAA GAAGGAGATG CCCCGATAAA AGTCAATCAG 
GATGTTAATT TCTATGTTAC TGAAATTGAA GCAGGAAAAG AAATGGAATT TGAGGTAAAA 
GAGGGTCGTC AGGCGTATGT AGTGCAGATA GAAGGAAAGT CGGAAATAAA TTCTACAGCT 
ATGAATCCGA GAGACGGATT GGAAACAATA GGGGAAAGCT TAAAAATAGC TGCACTGGAA 
AAATCGCATA TTCTTGTGAT AGAAATGAAA GAAAGAGAAG ATTTAAAATA A 

 

Protein sequence

MLRRLPVEKM GESNLGWLRS KFHFSFAEYY NEKNINFGVL RVINDDYIAP GTGFPTHPHR 
DMEIISYVIE GKLTHKDSMG NESTLERGEV QYMSAGTGVT HSEYNKHAED TRILQIWVLP 
DRKGHTPNYG EYKFKYEDRI GKWLHFVSSK EGDAPIKVNQ DVNFYVTEIE AGKEMEFEVK 
EGRQAYVVQI EGKSEINSTA MNPRDGLETI GESLKIAALE KSHILVIEMK EREDLK