Gene Sterm_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1956 
Symbol 
ID8597423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp2088005 
End bp2089177 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content38% 
IMG OID 
ProductMalate dehydrogenase (oxaloacetate- decarboxylating) 
Protein accessionYP_003308743 
Protein GI269120566 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTAT TTGACGAGTC ACTTAAATTG CACGAAAAAA ACAAAGGGAA AATAGAGGTA 
ATATCAAAGG TAAAGGTGGA AAACATGGAG GATCTGAGTC TGGCTTATTC TCCCGGAGTA
GCTGAGCCGT GTAAAAGAAT AGCTGAAAAT AAAGAAAATG TCTATAAATA TACATCAAAG
GGAAATATGA TAGCAGTGGT GACCGACGGC TCTGCTGTAC TGGGACTGGG AAATATCGGT
CCTGAAGCGG CACTTCCAGT GATGGAGGGA AAAGCGATTT TATTTAAGGA ATTTGCCGGA
GTGGATGCTT TTCCTATATG TCTTGATACA CAAGATACGG AAGAAATAAT AAGAACAGTA
AAGCTCCTTG CACCGGGACT CGGAGGTATA AATCTTGAGG ATATATCTGC ACCGAGATGT
ATAGAAATAG AAAGCAGATT AAAAAAAGAA TTGGATATTC CCGTTTTTCA TGATGATCAG
CATGGTACGG CAATAGTAGT AACTGCCGGT CTTATAAATG CATACAGGTT TCTGGGGAAA
AATCTTAAAG ATGCAAGAGT AGTAGTTAAC GGAGCAGGAG CAGCAGGGAG TTCCATCTGT
AAAATGATAA AGGAGCTTGG TGTAAGTGAT ATTATTGCAG TGGATAAAAC CGGAATATTA
AACCGGGATG ATATCAAAGA CTATAACGAG CTTCACAAAG AACTGGCAGA AATAACAAAT
ATAAATAATA AAAAAGGAAC ACTTAGTGAC GCCCTTGAAG GATCAGATAT ATTTATAGGC
GTATCAGCAG GAAATATACT AAAAAAAGAT ATGGTAAAGA AAATGAATAA AGATGCAGTG
ATTTTTGCCA TGGCAAATCC TGTGCCTGAA ATAATGCCCG AGGATGCACT GGAAGCAGGA
GCAGTTATAG TGGGAACAGG AAGATCGGAC TATCCTAATC AGATAAATAA TGTTCTGGCA
TTTCCGGGAC TTTTTAAAGG CGCACTTGAG GCTAAATCAA AAAAAATTAC AGAAGATATG
AAAATAGAGG CTGCAAAAGC TATAGCATAT ATTTTGAATG ATGACGATCT AAAAAAAGAT
TATATAATTC CTGATGTCTT TGATAAAAGA GTAGTAGAGA GCGTGGCCGA AGCAGTAAAA
AAAGTCGCTG TAAGCAGCGG TATATGCAGA TAG
 
Protein sequence
MSVFDESLKL HEKNKGKIEV ISKVKVENME DLSLAYSPGV AEPCKRIAEN KENVYKYTSK 
GNMIAVVTDG SAVLGLGNIG PEAALPVMEG KAILFKEFAG VDAFPICLDT QDTEEIIRTV
KLLAPGLGGI NLEDISAPRC IEIESRLKKE LDIPVFHDDQ HGTAIVVTAG LINAYRFLGK
NLKDARVVVN GAGAAGSSIC KMIKELGVSD IIAVDKTGIL NRDDIKDYNE LHKELAEITN
INNKKGTLSD ALEGSDIFIG VSAGNILKKD MVKKMNKDAV IFAMANPVPE IMPEDALEAG
AVIVGTGRSD YPNQINNVLA FPGLFKGALE AKSKKITEDM KIEAAKAIAY ILNDDDLKKD
YIIPDVFDKR VVESVAEAVK KVAVSSGICR