Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1766 |
Symbol | |
ID | 8597235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 1898685 |
End bp | 1899284 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_003308555 |
Protein GI | 269120378 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000016158 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATAT TGTTGGATAT AGGGCACGGA GGAAGCAAAA AATCAACAGG GGGAAAAGTA ATAAGAGATT TCGGAGCTGT CAGCCAAAGC TATAAAACAG ATGAGTTTCA CTGGAATGAA AATTTTGTGA AAAACTATCT GATACCGGAA TTTCAGAGGA ATAATCTGGA ATATGAAATT GTTCTGAGAA AAACCGGAAC TGAAGAATTA GTCAGTGATT TGAACAAAGC ATCAAAAACA GGGGATATAA TTTTATCCTT TCACCTGAAC AGCGACATAA AAGCTTCCGG AACTGAAGTA CTTTACTGGG AAACAAGTGT AAACGGAAAA AAGCTTGCGG GATTGCTGCA GAAGAAGCTT ACAGAAGTGC TGAAACTGCC TGACAGGGGA ATAAAAGGAA GAAGAAAGCC GCTTAACAGC AAGGATGCTT TGAATCAGAG AGGATGGACA ATGTTTAAGA ATACAAAAAT CCCTTTTGTA ATGATGGAAA GCTTTTTTAT CACTAATAAT AAAGATATGG AAACAGGAAA CAAAAATATT GCAGCAATGG CAAAAGCAGT AACAGAAGCA GTTTTGGAAT TCCGGGAGGG GAGAAAATGA
|
Protein sequence | MKILLDIGHG GSKKSTGGKV IRDFGAVSQS YKTDEFHWNE NFVKNYLIPE FQRNNLEYEI VLRKTGTEEL VSDLNKASKT GDIILSFHLN SDIKASGTEV LYWETSVNGK KLAGLLQKKL TEVLKLPDRG IKGRRKPLNS KDALNQRGWT MFKNTKIPFV MMESFFITNN KDMETGNKNI AAMAKAVTEA VLEFREGRK
|
| |