| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_1729 |
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| Symbol | |
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| ID | 8597198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sebaldella termitidis ATCC 33386 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013517 |
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| Strand | + |
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| Start bp | 1849912 |
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| End bp | 1856625 |
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| Gene Length | 6714 bp |
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| Protein Length | 2237 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | |
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| Product | outer membrane autotransporter barrel domain protein |
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| Protein accession | YP_003308518 |
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| Protein GI | 269120341 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.737065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA AAAATTTTTT GATGTTTTTT CTGGCGGTAA ATGCTTTTGC TGTTTCCCAA
GGAGCAGCAG AAAGTATAAA ACGTCCGGAA AAATATGAAA AACTTTATAA CGGGATGGTC
CAGAACATAG AAGCTGGAAA ATCTAACGTA AAAAATTATG AAGTATTGGA AAAAATACTT
GAAAAAAGAA ATAAAGAGCT TAAGGATCTC TATGAGCAGA GTGATTACAT CGTAAAACCC
GAGTATCTGG AATGGCAGAT ATTTTTCAGC GGTTTTTATT CTCACAGAGA ATCGGGGGAT
AACACACTTG CCAATGGTAC TTACCACTCT GATCCGAGCA ATGTAAACGG AAAATTTTAC
ACAGCTCTGG GAGAAGCAAA GCAGGTAGAT CTGGGATTAT ATATTCCAGA GCGTACTATA
AAAAGAAGTC CTGTAGAATT AAAACTGGTA AGTCCTCCGG AAATAAATCT GAGCAGTCTT
GATGTAAATC CGGAAGTGAA CCCAAGCGTA AGTCCGGATG CTGCTTCGGG TACTTATAAG
GAATATACGC CTGTCGGCAG TATGAAAAGC TTTCTTGAGG CTTATGAGAA TGTTTTTAAG
TCAGAAACAA ACAGCCAGCT AAAAGATGAC GGAGTTACAG AGCTTATAAA TTCAGGAGAT
CCCAGTAGTT CTTACAAAAT AAATTATAAT GTAAATACTG GTTTAAATAT AACTTATGAT
ACTGTAACAG ATTCTTTTAG TGAGAATAAA CTTTTTACAA ATGGTGATTC TCTGGTAACT
TGGGGAACGA ATTCAATAAC GACTTCTTAT GGAAATACTG CAAATGATCC TGCATTTTAT
GGAGGAGGAA CACGGGTAGC GGGAGTTTAC GGCGGAACTG GCAACAGTAT TACGAACAGC
AATCAGATGG ATTTAAAAGG ACCGTTTACT TATGGAATGG TTGCTGAAGG TGGTAACAGC
AATACTTTGA TTAATAATTC CACAGGAATA ATAAGTGATG ATAAGGAAAA TGATATTACC
GATACATGGT ATAATAATGA AATCCCTCAT ATCGGGGAAA CTATAACTTA TACTCAGGAA
AAAACAACTT CAGATCCGAA TATAGTAATA AATGATCCAT ATAGAACAAC AACAGTATCT
AAACATCCAG ACGGAAACAT AATATATGTA AATGGAAGAC CTGTATACAG ACATGGAGGG
ACGGCGACAA ATCCTGATGT TTCGTCAACT GTGACAACAA TTGATTCGAT TGATTATACA
CGAACAACTT CCGTTACTTC ATATACAGGC GGATATCTCG GATATAAAGT GGGAATGTTT
GTAAACAGTA ATTTGAATCC GATAAATACA ATCATACAAA ATGACGGTAA AATTAAATTT
AACGGTTATA GTTCAATAGG TATGTATACT TCTGCCGGTG TCAGATTATC TGATGTTCAG
ATGCTCAATA CAGCAACTAT AGATATAAAT ACAGGCAATT ATACTGGATA TTCTAATTTT
GGAATGAAAC TAGACGGCGT TGTTAATAAC GACCAGACTA AAAAAATAAT TTCAAATACC
GGAACAATTA GCATAAGTAA CGGAGCCGGT ATAGCAGTAG TAAACGGAAG CGTCGGAGAA
GGCTTTGTGG AAAATTCGGG GACAATCACT GTAACAAATG GAACCGGAGT TTATCTGGCA
CCAGTGTCAA CTAGTGCAAG ATTAGAAGAT GCGGTAAATA CAGCTTCCGG AATTATTGAT
GTAACTTCCG GAGCCGGAAT GTACGCTTTA GGCGGACGTG ACGAAATAAC AAGAGTTATA
AATAACGGGG AAATATCTGT TTTAGGCGGA ATGGGTATGG TTGCTTCGGG TAAAAATGCT
GAAGCAGTTA ATACAAGCAA TGATTTTAAA ATAAAGACTT CTACAGGCGG CTTCTATGCA
CATAACGGCG GAAAGGTCAT TAATAGTGCA GATTTGACTG TTAATTCTTC AGGAGTATCC
CTGTTTAATA TTGATGTTAA TTCTGAAGGA AGCAGTGTAG GAAATATAAT AATGGACGGT
ACCAATTCAG TTGCTGTTTA TAATAAAGGG AAATTTACAT CAACTGGCGA TATTGATATA
GCCAAAAGCG GGTCAATTGC TGTATATAGT ACTGGAACAG ATAATACAAA TATAAAAGCC
GATACTATAA AACTTGACGG AGCAAAGGGA GCAGCATTTT ATACAGACGG CGGAAAAATA
AATATATCTC CGAATACAGG GACAACAACA GCTGTAACAG TGTCAGGAGA CTCGTCATAC
TTATTTTATG ACAGCAGCTT TAAAACAGGA GCTGTTCCAA ATCAGACTTT TGTAATAGAC
GGAAATTTTA CTGCTAATGT AAAAGATGGG GCTATAGCTT TTGACTTTAA AAATAATTCA
GGAAATCTTA TAGATTATGT AAAAAATAGT CTTTTGAATA TAAAGAGCGG AACAACAACT
ATTAATATAG AAGGAACAGC ATTTCATGCA AAAAATTCCA CTATAAGTAT TGATGAAGTT
TCGCAGATAA AAACAACTGG CGGTCTTGCA TCAGGCTCTG TCATATTAAA AGGAAGCGAT
GTATTTTATG CAGAAGAAAG TACAATTAAT ATAGATCAGG ATTCTGATCT TGATGATTCT
GCGGATACAT ACCAAAAAAA TCAGAGTCAT ATAGCAAATT CAAATGTAAA TCTTCTGTCT
GGCATGACTA TATCGGGAAG TAAAAATGAT CAGTATGGAA TCGGGCAGGA AGATTACAAA
AACAGCGGTG TTACTTTAAC AAATGCCGGT GATATAATTC TTACAGGATC AGGAACTACC
GGAATATACG GGAATAATGC AAAAATTATA AATAATGGAA ATATAACAAC TGGAGACAGC
AGTACAGGAA TTTTTTCATC AAATAATGCA GAAGTTACAA ATACCGGAAA TATAAACTTC
GGGAATTCCG GTATAGGAAT TTACGGGATA AATACTTACG GTTCCAAAGT ACCTTCTTCC
GGTTCCAAAG TACCTTCTTC ATTTAATAAA ATAAATATAA CGATGTCATC GGGAACTATA
ACAGCTGACG GTACTACAGA AGGCTACGGT ATTTTTGCGA ATAATTCAAA AGGATATGGA
TTTTCTGAGG TAAACTTCGA TGGAGGGTTA ATTGATCTCA GCAAAATTTC TGCTGCGGAT
AAAAGCAAGG CAGTGGCTGT AGCTGTAAAG GATACAGACT TAAGCTCGTC AGGAAATATT
AATACCGCTG AAAACGGAAT AGCTTTTTAT ATAAACGGAG GAAATACAAG TATAACAGGC
GGTACTATTA ATTTAGACAA AGATAATTCA ATAGGTCTGG CTCTTCAAAA TATAGATACA
AGCAGTTTTA CAGGTACAGG AGCTGCATTT AATATAGATG GAAACGGTGT AATTCTTTTT
CATTTAAAAG ACTCAACAGG AATAAAGGAT GATTTTACGG TAAATGTTGC ATCAGGTTCT
AATTACAGAT ATGCAGATAT GAAAAACAGC TCATTTACTT TTGATAAATC CTTTAGTATA
GAGGATAATA TAAATCTTAT AGTTGCTGAT GCTTCGGCTG TTCTTCTGGG GACAAGCTCG
GATATTAGTT CCGCAGGAAC GGGAAATATA GGGGTATATG CTAAAAATAA AGCTTCAGCT
GCAGTTTTAA GTTCTCTCGG GGTTTCAGAC GAGATAACAA ACAAAGGAAA AATCAACTTG
GGGGATTCTT CTACAGGAAT TTATGCAGAA GGCGGTGCCG GATTATTAAA TGAAACTGCC
GGAATCATTA ATGTAGGAGA TAATTCACAG GGGATTTATG CAAGAAATTC CGGATCAGCA
GTAAACAGAG GAAAAATAAG CATCGGAGAT TCTTCAATAG GAATTTATTT TAATAATGCA
TCTGCAGCAG TCAATTACGG AGATATAACA AGCGGCTCGG ATAATGGCGT GGCGGTTTAT
ATGGATGATC AGACAGCAGG CTTTAGAAAT GACGGTCTGA TTTCATTAAG CGGTCAGAAT
AATATAGGTA TTTACGATAC GGGAACTGGT ATCAGAGTTA TTGATAACAA CGGGGAAATA
TCAGTAGGAG ATTCAGCTTC GGCAGACAGT CCGAATGTAG GTATATATTC TGTAGACGGT
TCTCTGACAA TAAATCATAA TACAAATGCC AAAATTACTG CCGGAATAAA TTCAATGGGA
ATTTATGCAA AAAATACAAA AATAAATGCA GAGGGAATAA TAAATATTGG AGATAACGGA
ACAGGAATAT ATGCTGATTC GGGATCAAAT GTGTATCTCG GCAGCAATGC AAGGCTGAAT
CTGGGAGCTG TAAATGCAGC TGGAGTATAT GCACTCGACG GGAGTATCGT CGATAACTAT
ACTTCTAATA TAATATATCC GTCGGATTCT TATGCATTTG TACTGAATTC AGGGGCAGTT
TTAAATAATT ATGCTGCAAA TACCATGCTT GATAACGGAA AAGTATACGC ATATTCTGAT
AATGCAGTAA TAAATAATAA GGGGAATTTT ACCCTGACAG GTACTGATAA TATAGTTTTA
TACGGAGTTA ACAGCTCTGC AGTAACTAAT TCAGGAAAAA TAGATGCAGG CGTAACTCAG
GGAAGCAATA TAGGAATATA TGTAAAAGAA AGCAGTGCGG TAAACAGCGG AAAAATAATA
ATGGGAGATT CTGTTATTGT TGATGAATAT AATCCTTTTG TAAATAAATA TTCAGTAGCA
ATATATGGAG AAAATTCCGA TATTTTAAAT GATACAAACG GTTCTGTTTC TGTCGGAGAA
AACTCTGCCG GATTATATGC AGTAGGCGGA AGTATAGTAA ATAAAGGGAC GGTAACTTCT
GTAAAAAACG GTGCAATCGG AATATTTATA GATAACGGTA CTGCAGAAAA TACAGGTCTC
ATAGATTTAT ACGGAGCTGA TTCAGTAGGG CTTGCAGGGA AAACAGGGGC AGTACTTACT
AACTCGGGAA CAATAAGAAT TCATGGAGAT AATTCCATAG GGATTTTTGC AAATTTAAGT
TCTTCGGTAA TAAACAAGGG AACTATTGAA GTATTGGGGA ATAACAGTAC AGGAATACAT
CTTCAGGGAA ACTCGGTACT TTTGAATGAA GGAACTATAG TACTCGGATC AAATCTTTCG
GAATCTGTGA AGGTATCATA TTCAACAGGA TACGACATAC CTGAAATACA GAATGCCGGA
ATAATAAAAG TATCCGAAAA ATTCGAAGTT CCTGCTGATT TTCAGATTTC AATAAAGCCG
GCTCCTTCTT CATTCAGAGA ACCGACTGCA TCTGAAATAT TCTCAGATAA TTATGCTCTT
GAAGATATCG ACGGAAGATA TTTGATATCA AATGCAGTAA GCTTTGTGGC GCCATATTTT
GCCGCGACAG AGCCTGTAGT AGTACTGCCT GATTTTTCAC AGCATACAAA TGCACTGGCA
TATAAGCTTG AAGATGTTTT TGTTCCTACC ACTCCTGACG GAGGACCGAA TTCAGGCAAA
GTAAGGGTAA AAAGCAAATC TATTACATGG GATGTTATTC CTGATGAAAA TGCTGACGGA
AATATAGATC TCTGGATGGT GAAAATTCCT TATAATGTTT ATACTAACGG TCTTTGGTAT
GACGGCTTCG GAAAATCGCT AGATGCAAAT TATGCCGGAG CAAATGCAGA AGGAATAGAA
ATCTTCGATA AAATAGATTA TATAGATAAT GAAAAAGATC TAAGACATAT TATGGCAAGT
TTGGGAGGAA GTGTATATTC CAATATAAAC CAGAGAGAGG AAGATATAGC AGAGGTATTC
GAAAGCTCGC TGGATCTTCT GCAAAGCTCG CATAATAATA CAAAAGAAAA TGTGAAGATA
AATGTAATTG CCGGAAAAGG AAACAGAAAA GAAAAGACAG ACGGTGTGGA AGAGTATGAT
TCTGCATATA CAGGAGTAAT GGCTCTGAGA GAAGTAGAAA GAACATACAG ACATACTTTC
GGATATTCGG CAGGATATCT TCATTCAGGC TTTGAATTCA AAGACGGCAA TGAAAGCGAA
GAATGGGTAG ATACATTGCA GCTTGGAGTT CACAGTAAAT ACAGGGCAGA TAACTGGGAA
CTGAGAAATG ATCTTACAGC AAGGGGAAGT ATTCATAATA TAGACAGAAA CATAGACTGG
CCGTCTCCGA ACAGCAGATC TGAAATGAAC GGTACATATG AAACTTACAG TCTTACAAGT
GATAACAGAC TCGGAAAAGA GTTCGGAGTA GGAAAAAATG CTTCTGTAAC ACCTTATGGA
GGTATTAGGG CAATGTATGT GGTAAGACCG ACTTTTGAAG AGGAAGGTTT GGAAAGATTA
AAAGTCGAGG GTAATGATGC ATGGAGTGTA AAACCAAGAG CCGGAGTAGA GCTTAAAGCT
TCGGTTCCGA TTGGGAAAAA CAGTGCATGG AAAGTAAAAG GAACTTTGGA TCTTGCTTAT
GAGTATGAGC TTGCTAATCT GAACGAGAGA GAAAGAGCTC AGCTTGTAGC AGCGGAAGAC
GGTTATCATG ATCTTGCAAA GCCGGAGGAA GAAAAAGGAC AGTTTAAAAC AAGGGCAGCA
ATAGGGGTAG AAGTAGAAGA AAGATACGGA GTCTTTTTGA CAGGCGAATA TGTAGCAGGT
GAAAAGAGTC AGGAAGAGTA TAGAGCTGGA GTAACATTAA AGGCTGTATT CTAA
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| Protein sequence | MKNKNFLMFF LAVNAFAVSQ GAAESIKRPE KYEKLYNGMV QNIEAGKSNV KNYEVLEKIL
EKRNKELKDL YEQSDYIVKP EYLEWQIFFS GFYSHRESGD NTLANGTYHS DPSNVNGKFY
TALGEAKQVD LGLYIPERTI KRSPVELKLV SPPEINLSSL DVNPEVNPSV SPDAASGTYK
EYTPVGSMKS FLEAYENVFK SETNSQLKDD GVTELINSGD PSSSYKINYN VNTGLNITYD
TVTDSFSENK LFTNGDSLVT WGTNSITTSY GNTANDPAFY GGGTRVAGVY GGTGNSITNS
NQMDLKGPFT YGMVAEGGNS NTLINNSTGI ISDDKENDIT DTWYNNEIPH IGETITYTQE
KTTSDPNIVI NDPYRTTTVS KHPDGNIIYV NGRPVYRHGG TATNPDVSST VTTIDSIDYT
RTTSVTSYTG GYLGYKVGMF VNSNLNPINT IIQNDGKIKF NGYSSIGMYT SAGVRLSDVQ
MLNTATIDIN TGNYTGYSNF GMKLDGVVNN DQTKKIISNT GTISISNGAG IAVVNGSVGE
GFVENSGTIT VTNGTGVYLA PVSTSARLED AVNTASGIID VTSGAGMYAL GGRDEITRVI
NNGEISVLGG MGMVASGKNA EAVNTSNDFK IKTSTGGFYA HNGGKVINSA DLTVNSSGVS
LFNIDVNSEG SSVGNIIMDG TNSVAVYNKG KFTSTGDIDI AKSGSIAVYS TGTDNTNIKA
DTIKLDGAKG AAFYTDGGKI NISPNTGTTT AVTVSGDSSY LFYDSSFKTG AVPNQTFVID
GNFTANVKDG AIAFDFKNNS GNLIDYVKNS LLNIKSGTTT INIEGTAFHA KNSTISIDEV
SQIKTTGGLA SGSVILKGSD VFYAEESTIN IDQDSDLDDS ADTYQKNQSH IANSNVNLLS
GMTISGSKND QYGIGQEDYK NSGVTLTNAG DIILTGSGTT GIYGNNAKII NNGNITTGDS
STGIFSSNNA EVTNTGNINF GNSGIGIYGI NTYGSKVPSS GSKVPSSFNK INITMSSGTI
TADGTTEGYG IFANNSKGYG FSEVNFDGGL IDLSKISAAD KSKAVAVAVK DTDLSSSGNI
NTAENGIAFY INGGNTSITG GTINLDKDNS IGLALQNIDT SSFTGTGAAF NIDGNGVILF
HLKDSTGIKD DFTVNVASGS NYRYADMKNS SFTFDKSFSI EDNINLIVAD ASAVLLGTSS
DISSAGTGNI GVYAKNKASA AVLSSLGVSD EITNKGKINL GDSSTGIYAE GGAGLLNETA
GIINVGDNSQ GIYARNSGSA VNRGKISIGD SSIGIYFNNA SAAVNYGDIT SGSDNGVAVY
MDDQTAGFRN DGLISLSGQN NIGIYDTGTG IRVIDNNGEI SVGDSASADS PNVGIYSVDG
SLTINHNTNA KITAGINSMG IYAKNTKINA EGIINIGDNG TGIYADSGSN VYLGSNARLN
LGAVNAAGVY ALDGSIVDNY TSNIIYPSDS YAFVLNSGAV LNNYAANTML DNGKVYAYSD
NAVINNKGNF TLTGTDNIVL YGVNSSAVTN SGKIDAGVTQ GSNIGIYVKE SSAVNSGKII
MGDSVIVDEY NPFVNKYSVA IYGENSDILN DTNGSVSVGE NSAGLYAVGG SIVNKGTVTS
VKNGAIGIFI DNGTAENTGL IDLYGADSVG LAGKTGAVLT NSGTIRIHGD NSIGIFANLS
SSVINKGTIE VLGNNSTGIH LQGNSVLLNE GTIVLGSNLS ESVKVSYSTG YDIPEIQNAG
IIKVSEKFEV PADFQISIKP APSSFREPTA SEIFSDNYAL EDIDGRYLIS NAVSFVAPYF
AATEPVVVLP DFSQHTNALA YKLEDVFVPT TPDGGPNSGK VRVKSKSITW DVIPDENADG
NIDLWMVKIP YNVYTNGLWY DGFGKSLDAN YAGANAEGIE IFDKIDYIDN EKDLRHIMAS
LGGSVYSNIN QREEDIAEVF ESSLDLLQSS HNNTKENVKI NVIAGKGNRK EKTDGVEEYD
SAYTGVMALR EVERTYRHTF GYSAGYLHSG FEFKDGNESE EWVDTLQLGV HSKYRADNWE
LRNDLTARGS IHNIDRNIDW PSPNSRSEMN GTYETYSLTS DNRLGKEFGV GKNASVTPYG
GIRAMYVVRP TFEEEGLERL KVEGNDAWSV KPRAGVELKA SVPIGKNSAW KVKGTLDLAY
EYELANLNER ERAQLVAAED GYHDLAKPEE EKGQFKTRAA IGVEVEERYG VFLTGEYVAG
EKSQEEYRAG VTLKAVF
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