Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_1364 |
Symbol | |
ID | 8596840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 1447771 |
End bp | 1448565 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_003308160 |
Protein GI | 269119983 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000696413 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAGT TTTTTTTATT TTTTTTTATC AGTATTTTTA TGTTCACAGC TCAGAGTAAT CAGCGGGATC TGATTACACA GGAGATGAAA AATTTCGGCA TAAAGCAGAA ATCAATTGAT TTATACTGGA AAACCAAAGA ATTTACAGTT CCTGACAAGG AATATGAGAA AACGCTGAAT AAAGCTATAG AAGCTGATCC GAGAAATTAT TTTGCGCTGG ATGATATGGG AGTTCATTAC AGACGTTCGA ATAATCCGGA TAAAGCAATA GAGTATTATA AAAAATCTAT TGCGGTAAAT CCGAATAATC CGTTTCCATA TTTTAATGCC GGTGTAGCAT ATATGTATAA AAAAGATTTT GTAAATGCTG AAAGGATATA CAAGCAGCTG ATTACGGCTA TTCCTGACTA TCCTGAAGGA TACTACGGAC TGGGGCAGGT TTATCTGAAT ATGGAAAATT ATGCAAAAGC TCTGGAATTT ATACAAAAGG CAAAGGAAAA ATACAAGAAT CTGGATACTA AAAAATATTT TGAGGAAGCT GCAAAAAAAG ATATGTATAT TGCAGACTGT AATTATTTGG AGGGACAGAT AAATTACAGA ATGAAAGATT ATCAAAAGGC TGTTGACGGT TTTTTTGATT CATTTGAGGA TATGAAAGCT ATAAGATATT ATGCTCTTTC TGATTTTGCC ACGCTTGCAT ATTTTGCAAA TGAAGGATTA AAAGGAACAA ACCCGAAACA ATATGATAAA AATCTTAAAA AATTTGAAGC TGCGGGTATA AAAATGAAGC GGTAA
|
Protein sequence | MKKFFLFFFI SIFMFTAQSN QRDLITQEMK NFGIKQKSID LYWKTKEFTV PDKEYEKTLN KAIEADPRNY FALDDMGVHY RRSNNPDKAI EYYKKSIAVN PNNPFPYFNA GVAYMYKKDF VNAERIYKQL ITAIPDYPEG YYGLGQVYLN MENYAKALEF IQKAKEKYKN LDTKKYFEEA AKKDMYIADC NYLEGQINYR MKDYQKAVDG FFDSFEDMKA IRYYALSDFA TLAYFANEGL KGTNPKQYDK NLKKFEAAGI KMKR
|
| |