Gene Sterm_1278 details

Gene Information

• Locus tag: Sterm_1278
• ID: 8596756
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 1381307
• End bp: 1382050
• Gene Length: 744 bp
• Protein Length: 247 aa
• Translation table: 11
• GC content: 33%
• Product: cell wall hydrolase/autolysin
• Protein accession: YP_003308076
• Protein GI: 269119899

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACACA GATATAAAGA CCCGAAAGAG CTTATCGGGA TAGAATTTGA AGAATCAGGA 
CAAACTTATA AAATAACCGG AATAGGAGAA ACAACAGAGG AATTCATGAC ACTGTTTACA 
GAAAAAGTAA AAGAGGAAAT AATTAATTGG AATGGAAAAG TACTTATTGA TGTAGGTCAC 
GGTGGAACCA AAACCACATC AAGTGGCAAA AAATACAGAG ATTACGGAGC TGTAAACGAT 
AAGTCAAAAG TGGACGAATT TACATGGAAT CATGACTTTG TTATGAGATA TATAATTCCA 
GAATTAAATG CATCTGGAAT AGCAAATAAA GTAGTTTTAA GAAGCACAAA TATAACAAAA 
CTTGTTACTG ATTTAAATAA AGAATCAGGA AAAGATGATA TTATTCTATC TTTTCACCTG 
AACAGTGATA TAAAAGCTTC TGGAACAGAG ACATTGTACT GGCATACAAG TGAAAAAGGC 
AAAAAGCTTG CGGGACTAAT TCAAAAAGGA CTGGTAGGAG TTTTAGGGTT GCCGGACAGA 
GGAATCAAAA TAAGAAGAAA ACCTTTAGAT AATGCTGATG CATTAAATCA AAGAGGTTGG 
ACAATGTTTA AAGATACCAA AGTTCCATTT GTAATGTTAG AAAGTTTCTT TATTACAAAT 
GACGGGGATC TCAAAAGAGG AAATGAAAAA AAGGCAGAGT TAGCAAAAGC TGTGGTATCA 
GCAATAAAAG AATATATAAA ATAA 

 

Protein sequence

MEHRYKDPKE LIGIEFEESG QTYKITGIGE TTEEFMTLFT EKVKEEIINW NGKVLIDVGH 
GGTKTTSSGK KYRDYGAVND KSKVDEFTWN HDFVMRYIIP ELNASGIANK VVLRSTNITK 
LVTDLNKESG KDDIILSFHL NSDIKASGTE TLYWHTSEKG KKLAGLIQKG LVGVLGLPDR 
GIKIRRKPLD NADALNQRGW TMFKDTKVPF VMLESFFITN DGDLKRGNEK KAELAKAVVS 
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