Gene Sterm_1232 details

Gene Information

• Locus tag: Sterm_1232
• ID: 8596711
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 1340303
• End bp: 1341007
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 37%
• Product: SMF family protein
• Protein accession: YP_003308031
• Protein GI: 269119854

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.25702
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGGTGGA TAAACTTAAG GGAGTTTGGA ATAAAGGACT CCCTCATATT AAAATTTATG 
AAAGAATTCA AAAGCTTTGA ATCATTTATC AGAGATGAAA ATCTCAGAAT ATTGGACAGA 
GATATAAGAG CAAAGGTTTT ACTCGCAGCT TTGCATGATA ACAGAAAATT TTATGAAAAA 
CTGCAAGAGA GTAATATCCG TTTGCTAGAA TATACAAGTG ATGATTATCC GGAAAATCTG 
AGAAATATAC AGGATCCGCC GCTTTTCCTT TACGTTGCCG GAAAGATAAA ATTCGGTGAA 
AGAAATATCG GGGTGGTAGG AACCAGAAGA AATACAATTT ATGGAAAGGT TTCCTGTGAA 
AGTATATTAA AGGAATTACT GGAATATGAT GTGAACATAG TCAGCGGTCT GGCACTTGGA 
ATAGACACCA TTGCCCATGA ATTCACACTA AAGAAAAACT GCTGCTGTAT CGGCGTAGTA 
GGAAGCGGAC TGGATAAAAT ATTTCCTTAT GAAAGCAGAA AATTATGGGA AAGAATACCT 
GAAAACGGAA TGTTAATAAG TGAGTATCCG CCGGGAAGCG AACCTCTGAA ATGGAATTTT 
CCAAGAAGAA ACAGAATTAT TGCAGGACTT TCGCAGGGGA TACTTTTATG TGAGAGCTAT 
GAGAAGGGAG GAGGTCTAGT AAATAGTCGC TTCCAGAGGA AATAA 

 

Protein sequence

MGWINLREFG IKDSLILKFM KEFKSFESFI RDENLRILDR DIRAKVLLAA LHDNRKFYEK 
LQESNIRLLE YTSDDYPENL RNIQDPPLFL YVAGKIKFGE RNIGVVGTRR NTIYGKVSCE 
SILKELLEYD VNIVSGLALG IDTIAHEFTL KKNCCCIGVV GSGLDKIFPY ESRKLWERIP 
ENGMLISEYP PGSEPLKWNF PRRNRIIAGL SQGILLCESY EKGGGLVNSR FQRK